Kwalitee Issues

has_human_readable_license

Add a section called "LICENSE" to the documentation, or add a file named LICENSE to the distribution.

has_license_in_source_file

Add =head1 LICENSE and the text of the license to the main module in your code.

has_readme

Add a README to the distribution. It should contain a quick description of your module and how to install it.

no_pod_errors

Remove the POD errors. You can check for POD errors automatically by including Test::Pod to your test suite.

Error: Bio-MAGE-20030502.3/MAGE/Array/Array.pm -- Around line 484: '=item' outside of any '=over'Around line 569: You forgot a '=back' before '=head2'Around line 1029: Expected '=item 2'Around line 1034: Expected '=item 3'Around line 1039: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/ArrayGroup.pm -- Around line 526: '=item' outside of any '=over'Around line 611: You forgot a '=back' before '=head2'Around line 1363: Expected '=item 2'Around line 1368: Expected '=item 3'Around line 1373: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/ArrayManufacture.pm -- Around line 499: '=item' outside of any '=over'Around line 584: You forgot a '=back' before '=head2'Around line 900: Expected '=item 2'Around line 905: Expected '=item 3'Around line 910: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/ArrayManufactureDeviation.pm -- Around line 323: '=item' outside of any '=over'Around line 408: You forgot a '=back' before '=head2'Around line 436: Expected '=item 2'Around line 441: Expected '=item 3'Around line 446: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/FeatureDefect.pm -- Around line 356: '=item' outside of any '=over'Around line 441: You forgot a '=back' before '=head2'Around line 469: Expected '=item 2'Around line 474: Expected '=item 3'Around line 479: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/Fiducial.pm -- Around line 395: '=item' outside of any '=over'Around line 480: You forgot a '=back' before '=head2'Around line 508: Expected '=item 2'Around line 513: Expected '=item 3'Around line 518: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/ManufactureLIMS.pm -- Around line 415: '=item' outside of any '=over'Around line 500: You forgot a '=back' before '=head2'Around line 600: Expected '=item 2'Around line 605: Expected '=item 3'Around line 610: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/ManufactureLIMSBiomaterial.pm -- Around line 371: '=item' outside of any '=over'Around line 456: You forgot a '=back' before '=head2'Around line 772: Expected '=item 2'Around line 777: Expected '=item 3'Around line 782: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/PositionDelta.pm -- Around line 308: '=item' outside of any '=over'Around line 393: You forgot a '=back' before '=head2'Around line 565: Expected '=item 2'Around line 570: Expected '=item 3'Around line 575: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/ZoneDefect.pm -- Around line 356: '=item' outside of any '=over'Around line 441: You forgot a '=back' before '=head2'Around line 469: Expected '=item 2'Around line 474: Expected '=item 3'Around line 479: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/ArrayDesign.pm -- Around line 510: '=item' outside of any '=over'Around line 595: You forgot a '=back' before '=head2'Around line 911: Expected '=item 2'Around line 916: Expected '=item 3'Around line 921: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/CompositeGroup.pm -- Around line 375: '=item' outside of any '=over'Around line 460: You forgot a '=back' before '=head2'Around line 632: Expected '=item 2'Around line 637: Expected '=item 3'Around line 642: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/DesignElementGroup.pm -- Around line 398: '=item' outside of any '=over'Around line 483: You forgot a '=back' before '=head2'Around line 655: Expected '=item 2'Around line 660: Expected '=item 3'Around line 665: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/FeatureGroup.pm -- Around line 501: '=item' outside of any '=over'Around line 586: You forgot a '=back' before '=head2'Around line 974: Expected '=item 2'Around line 979: Expected '=item 3'Around line 984: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/PhysicalArrayDesign.pm -- Around line 467: '=item' outside of any '=over'Around line 552: You forgot a '=back' before '=head2'Around line 868: Expected '=item 2'Around line 873: Expected '=item 3'Around line 878: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/ReporterGroup.pm -- Around line 376: '=item' outside of any '=over'Around line 461: You forgot a '=back' before '=head2'Around line 633: Expected '=item 2'Around line 638: Expected '=item 3'Around line 643: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/Zone.pm -- Around line 403: '=item' outside of any '=over'Around line 488: You forgot a '=back' before '=head2'Around line 1092: Expected '=item 2'Around line 1097: Expected '=item 3'Around line 1102: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/ZoneGroup.pm -- Around line 392: '=item' outside of any '=over'Around line 477: You forgot a '=back' before '=head2'Around line 793: Expected '=item 2'Around line 798: Expected '=item 3'Around line 803: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/ZoneLayout.pm -- Around line 326: '=item' outside of any '=over'Around line 411: You forgot a '=back' before '=head2'Around line 727: Expected '=item 2'Around line 732: Expected '=item 3'Around line 737: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/AuditAndSecurity/Audit.pm -- Around line 349: '=item' outside of any '=over'Around line 434: You forgot a '=back' before '=head2'Around line 610: Expected '=item 2'Around line 615: Expected '=item 3'Around line 620: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/AuditAndSecurity/Contact.pm -- Around line 411: '=item' outside of any '=over'Around line 496: You forgot a '=back' before '=head2'Around line 1100: Expected '=item 2'Around line 1105: Expected '=item 3'Around line 1110: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/AuditAndSecurity/Organization.pm -- Around line 422: '=item' outside of any '=over'Around line 507: You forgot a '=back' before '=head2'Around line 1111: Expected '=item 2'Around line 1116: Expected '=item 3'Around line 1121: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/AuditAndSecurity/Person.pm -- Around line 449: '=item' outside of any '=over'Around line 534: You forgot a '=back' before '=head2'Around line 1354: Expected '=item 2'Around line 1359: Expected '=item 3'Around line 1364: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/AuditAndSecurity/Security.pm -- Around line 382: '=item' outside of any '=over'Around line 467: You forgot a '=back' before '=head2'Around line 639: Expected '=item 2'Around line 644: Expected '=item 3'Around line 649: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/AuditAndSecurity/SecurityGroup.pm -- Around line 349: '=item' outside of any '=over'Around line 434: You forgot a '=back' before '=head2'Around line 606: Expected '=item 2'Around line 611: Expected '=item 3'Around line 616: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BQS/BibliographicReference.pm -- Around line 453: '=item' outside of any '=over'Around line 538: You forgot a '=back' before '=head2'Around line 1286: Expected '=item 2'Around line 1291: Expected '=item 3'Around line 1296: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/BioAssay.pm -- Around line 399: '=item' outside of any '=over'Around line 484: You forgot a '=back' before '=head2'Around line 656: Expected '=item 2'Around line 661: Expected '=item 3'Around line 666: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/BioAssayCreation.pm -- Around line 439: '=item' outside of any '=over'Around line 524: You forgot a '=back' before '=head2'Around line 696: Expected '=item 2'Around line 701: Expected '=item 3'Around line 706: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/BioAssayTreatment.pm -- Around line 406: '=item' outside of any '=over'Around line 491: You forgot a '=back' before '=head2'Around line 663: Expected '=item 2'Around line 668: Expected '=item 3'Around line 673: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/Channel.pm -- Around line 349: '=item' outside of any '=over'Around line 434: You forgot a '=back' before '=head2'Around line 606: Expected '=item 2'Around line 611: Expected '=item 3'Around line 616: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/DerivedBioAssay.pm -- Around line 441: '=item' outside of any '=over'Around line 526: You forgot a '=back' before '=head2'Around line 698: Expected '=item 2'Around line 703: Expected '=item 3'Around line 708: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/FeatureExtraction.pm -- Around line 395: '=item' outside of any '=over'Around line 480: You forgot a '=back' before '=head2'Around line 652: Expected '=item 2'Around line 657: Expected '=item 3'Around line 662: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/Hybridization.pm -- Around line 367: '=item' outside of any '=over'Around line 452: You forgot a '=back' before '=head2'Around line 624: Expected '=item 2'Around line 629: Expected '=item 3'Around line 634: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/Image.pm -- Around line 392: '=item' outside of any '=over'Around line 477: You forgot a '=back' before '=head2'Around line 721: Expected '=item 2'Around line 726: Expected '=item 3'Around line 731: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/ImageAcquisition.pm -- Around line 388: '=item' outside of any '=over'Around line 473: You forgot a '=back' before '=head2'Around line 645: Expected '=item 2'Around line 650: Expected '=item 3'Around line 655: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/MeasuredBioAssay.pm -- Around line 408: '=item' outside of any '=over'Around line 493: You forgot a '=back' before '=head2'Around line 665: Expected '=item 2'Around line 670: Expected '=item 3'Around line 675: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/PhysicalBioAssay.pm -- Around line 441: '=item' outside of any '=over'Around line 526: You forgot a '=back' before '=head2'Around line 698: Expected '=item 2'Around line 703: Expected '=item 3'Around line 708: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioAssayData.pm -- Around line 491: '=item' outside of any '=over'Around line 576: You forgot a '=back' before '=head2'Around line 748: Expected '=item 2'Around line 753: Expected '=item 3'Around line 758: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioAssayDatum.pm -- Around line 365: '=item' outside of any '=over'Around line 450: You forgot a '=back' before '=head2'Around line 550: Expected '=item 2'Around line 555: Expected '=item 3'Around line 560: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioAssayDimension.pm -- Around line 349: '=item' outside of any '=over'Around line 434: You forgot a '=back' before '=head2'Around line 606: Expected '=item 2'Around line 611: Expected '=item 3'Around line 616: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioAssayMap.pm -- Around line 395: '=item' outside of any '=over'Around line 480: You forgot a '=back' before '=head2'Around line 652: Expected '=item 2'Around line 657: Expected '=item 3'Around line 662: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioAssayMapping.pm -- Around line 290: '=item' outside of any '=over'Around line 375: You forgot a '=back' before '=head2'Around line 403: Expected '=item 2'Around line 408: Expected '=item 3'Around line 413: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioDataCube.pm -- Around line 280: '=item' outside of any '=over'Around line 365: You forgot a '=back' before '=head2'Around line 541: Expected '=item 2'Around line 546: Expected '=item 3'Around line 551: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioDataTuples.pm -- Around line 290: '=item' outside of any '=over'Around line 375: You forgot a '=back' before '=head2'Around line 403: Expected '=item 2'Around line 408: Expected '=item 3'Around line 413: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioDataValues.pm -- Around line 276: '=item' outside of any '=over'Around line 361: You forgot a '=back' before '=head2'Around line 389: Expected '=item 2'Around line 394: Expected '=item 3'Around line 399: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/CompositeSequenceDimension.pm -- Around line 349: '=item' outside of any '=over'Around line 434: You forgot a '=back' before '=head2'Around line 606: Expected '=item 2'Around line 611: Expected '=item 3'Around line 616: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/DerivedBioAssayData.pm -- Around line 414: '=item' outside of any '=over'Around line 499: You forgot a '=back' before '=head2'Around line 671: Expected '=item 2'Around line 676: Expected '=item 3'Around line 681: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/DesignElementDimension.pm -- Around line 333: '=item' outside of any '=over'Around line 418: You forgot a '=back' before '=head2'Around line 590: Expected '=item 2'Around line 595: Expected '=item 3'Around line 600: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/DesignElementMap.pm -- Around line 345: '=item' outside of any '=over'Around line 430: You forgot a '=back' before '=head2'Around line 602: Expected '=item 2'Around line 607: Expected '=item 3'Around line 612: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/DesignElementMapping.pm -- Around line 290: '=item' outside of any '=over'Around line 375: You forgot a '=back' before '=head2'Around line 403: Expected '=item 2'Around line 408: Expected '=item 3'Around line 413: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/FeatureDimension.pm -- Around line 349: '=item' outside of any '=over'Around line 434: You forgot a '=back' before '=head2'Around line 606: Expected '=item 2'Around line 611: Expected '=item 3'Around line 616: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/MeasuredBioAssayData.pm -- Around line 380: '=item' outside of any '=over'Around line 465: You forgot a '=back' before '=head2'Around line 637: Expected '=item 2'Around line 642: Expected '=item 3'Around line 647: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/QuantitationTypeDimension.pm -- Around line 349: '=item' outside of any '=over'Around line 434: You forgot a '=back' before '=head2'Around line 606: Expected '=item 2'Around line 611: Expected '=item 3'Around line 616: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/QuantitationTypeMap.pm -- Around line 395: '=item' outside of any '=over'Around line 480: You forgot a '=back' before '=head2'Around line 652: Expected '=item 2'Around line 657: Expected '=item 3'Around line 662: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/QuantitationTypeMapping.pm -- Around line 290: '=item' outside of any '=over'Around line 375: You forgot a '=back' before '=head2'Around line 403: Expected '=item 2'Around line 408: Expected '=item 3'Around line 413: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/ReporterDimension.pm -- Around line 349: '=item' outside of any '=over'Around line 434: You forgot a '=back' before '=head2'Around line 606: Expected '=item 2'Around line 611: Expected '=item 3'Around line 616: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/Transformation.pm -- Around line 494: '=item' outside of any '=over'Around line 579: You forgot a '=back' before '=head2'Around line 751: Expected '=item 2'Around line 756: Expected '=item 3'Around line 761: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioEvent/BioEvent.pm -- Around line 375: '=item' outside of any '=over'Around line 460: You forgot a '=back' before '=head2'Around line 632: Expected '=item 2'Around line 637: Expected '=item 3'Around line 642: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioEvent/Map.pm -- Around line 345: '=item' outside of any '=over'Around line 430: You forgot a '=back' before '=head2'Around line 602: Expected '=item 2'Around line 607: Expected '=item 3'Around line 612: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/BioMaterial.pm -- Around line 462: '=item' outside of any '=over'Around line 547: You forgot a '=back' before '=head2'Around line 719: Expected '=item 2'Around line 724: Expected '=item 3'Around line 729: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/BioMaterialMeasurement.pm -- Around line 323: '=item' outside of any '=over'Around line 408: You forgot a '=back' before '=head2'Around line 436: Expected '=item 2'Around line 441: Expected '=item 3'Around line 446: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/BioSample.pm -- Around line 401: '=item' outside of any '=over'Around line 486: You forgot a '=back' before '=head2'Around line 658: Expected '=item 2'Around line 663: Expected '=item 3'Around line 668: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/BioSource.pm -- Around line 401: '=item' outside of any '=over'Around line 486: You forgot a '=back' before '=head2'Around line 658: Expected '=item 2'Around line 663: Expected '=item 3'Around line 668: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/Compound.pm -- Around line 424: '=item' outside of any '=over'Around line 509: You forgot a '=back' before '=head2'Around line 753: Expected '=item 2'Around line 758: Expected '=item 3'Around line 763: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/CompoundMeasurement.pm -- Around line 323: '=item' outside of any '=over'Around line 408: You forgot a '=back' before '=head2'Around line 436: Expected '=item 2'Around line 441: Expected '=item 3'Around line 446: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/LabeledExtract.pm -- Around line 401: '=item' outside of any '=over'Around line 486: You forgot a '=back' before '=head2'Around line 658: Expected '=item 2'Around line 663: Expected '=item 3'Around line 668: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/Treatment.pm -- Around line 470: '=item' outside of any '=over'Around line 555: You forgot a '=back' before '=head2'Around line 799: Expected '=item 2'Around line 804: Expected '=item 3'Around line 809: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioSequence/BioSequence.pm -- Around line 550: '=item' outside of any '=over'Around line 635: You forgot a '=back' before '=head2'Around line 1097: Expected '=item 2'Around line 1102: Expected '=item 3'Around line 1107: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioSequence/SeqFeature.pm -- Around line 343: '=item' outside of any '=over'Around line 428: You forgot a '=back' before '=head2'Around line 532: Expected '=item 2'Around line 537: Expected '=item 3'Around line 542: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioSequence/SeqFeatureLocation.pm -- Around line 332: '=item' outside of any '=over'Around line 417: You forgot a '=back' before '=head2'Around line 517: Expected '=item 2'Around line 522: Expected '=item 3'Around line 527: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioSequence/SequencePosition.pm -- Around line 288: '=item' outside of any '=over'Around line 373: You forgot a '=back' before '=head2'Around line 545: Expected '=item 2'Around line 550: Expected '=item 3'Around line 555: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Describable.pm -- Around line 400: '=item' outside of any '=over'Around line 485: You forgot a '=back' before '=head2'Around line 513: Expected '=item 2'Around line 518: Expected '=item 3'Around line 523: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Description/Database.pm -- Around line 367: '=item' outside of any '=over'Around line 452: You forgot a '=back' before '=head2'Around line 768: Expected '=item 2'Around line 773: Expected '=item 3'Around line 778: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Description/DatabaseEntry.pm -- Around line 350: '=item' outside of any '=over'Around line 435: You forgot a '=back' before '=head2'Around line 679: Expected '=item 2'Around line 684: Expected '=item 3'Around line 689: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Description/Description.pm -- Around line 446: '=item' outside of any '=over'Around line 531: You forgot a '=back' before '=head2'Around line 703: Expected '=item 2'Around line 708: Expected '=item 3'Around line 713: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Description/ExternalReference.pm -- Around line 292: '=item' outside of any '=over'Around line 377: You forgot a '=back' before '=head2'Around line 693: Expected '=item 2'Around line 698: Expected '=item 3'Around line 703: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Description/OntologyEntry.pm -- Around line 354: '=item' outside of any '=over'Around line 439: You forgot a '=back' before '=head2'Around line 683: Expected '=item 2'Around line 688: Expected '=item 3'Around line 693: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/CompositeCompositeMap.pm -- Around line 395: '=item' outside of any '=over'Around line 480: You forgot a '=back' before '=head2'Around line 652: Expected '=item 2'Around line 657: Expected '=item 3'Around line 662: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/CompositePosition.pm -- Around line 343: '=item' outside of any '=over'Around line 428: You forgot a '=back' before '=head2'Around line 600: Expected '=item 2'Around line 605: Expected '=item 3'Around line 610: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/CompositeSequence.pm -- Around line 429: '=item' outside of any '=over'Around line 514: You forgot a '=back' before '=head2'Around line 686: Expected '=item 2'Around line 691: Expected '=item 3'Around line 696: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/DesignElement.pm -- Around line 366: '=item' outside of any '=over'Around line 451: You forgot a '=back' before '=head2'Around line 623: Expected '=item 2'Around line 628: Expected '=item 3'Around line 633: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/Feature.pm -- Around line 528: '=item' outside of any '=over'Around line 613: You forgot a '=back' before '=head2'Around line 785: Expected '=item 2'Around line 790: Expected '=item 3'Around line 795: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/FeatureInformation.pm -- Around line 323: '=item' outside of any '=over'Around line 408: You forgot a '=back' before '=head2'Around line 436: Expected '=item 2'Around line 441: Expected '=item 3'Around line 446: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/FeatureLocation.pm -- Around line 274: '=item' outside of any '=over'Around line 359: You forgot a '=back' before '=head2'Around line 531: Expected '=item 2'Around line 536: Expected '=item 3'Around line 541: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/FeatureReporterMap.pm -- Around line 395: '=item' outside of any '=over'Around line 480: You forgot a '=back' before '=head2'Around line 652: Expected '=item 2'Around line 657: Expected '=item 3'Around line 662: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/MismatchInformation.pm -- Around line 283: '=item' outside of any '=over'Around line 368: You forgot a '=back' before '=head2'Around line 612: Expected '=item 2'Around line 617: Expected '=item 3'Around line 622: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/Position.pm -- Around line 308: '=item' outside of any '=over'Around line 393: You forgot a '=back' before '=head2'Around line 565: Expected '=item 2'Around line 570: Expected '=item 3'Around line 575: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/Reporter.pm -- Around line 463: '=item' outside of any '=over'Around line 548: You forgot a '=back' before '=head2'Around line 720: Expected '=item 2'Around line 725: Expected '=item 3'Around line 730: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/ReporterCompositeMap.pm -- Around line 395: '=item' outside of any '=over'Around line 480: You forgot a '=back' before '=head2'Around line 652: Expected '=item 2'Around line 657: Expected '=item 3'Around line 662: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/ReporterPosition.pm -- Around line 343: '=item' outside of any '=over'Around line 428: You forgot a '=back' before '=head2'Around line 600: Expected '=item 2'Around line 605: Expected '=item 3'Around line 610: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Experiment/Experiment.pm -- Around line 481: '=item' outside of any '=over'Around line 566: You forgot a '=back' before '=head2'Around line 738: Expected '=item 2'Around line 743: Expected '=item 3'Around line 748: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Experiment/ExperimentDesign.pm -- Around line 494: '=item' outside of any '=over'Around line 579: You forgot a '=back' before '=head2'Around line 607: Expected '=item 2'Around line 612: Expected '=item 3'Around line 617: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Experiment/ExperimentalFactor.pm -- Around line 415: '=item' outside of any '=over'Around line 500: You forgot a '=back' before '=head2'Around line 672: Expected '=item 2'Around line 677: Expected '=item 3'Around line 682: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Experiment/FactorValue.pm -- Around line 415: '=item' outside of any '=over'Around line 500: You forgot a '=back' before '=head2'Around line 672: Expected '=item 2'Around line 677: Expected '=item 3'Around line 682: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Extendable.pm -- Around line 361: '=item' outside of any '=over'Around line 446: You forgot a '=back' before '=head2'Around line 474: Expected '=item 2'Around line 479: Expected '=item 3'Around line 484: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/HigherLevelAnalysis/BioAssayDataCluster.pm -- Around line 382: '=item' outside of any '=over'Around line 467: You forgot a '=back' before '=head2'Around line 639: Expected '=item 2'Around line 644: Expected '=item 3'Around line 649: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/HigherLevelAnalysis/Node.pm -- Around line 395: '=item' outside of any '=over'Around line 480: You forgot a '=back' before '=head2'Around line 508: Expected '=item 2'Around line 513: Expected '=item 3'Around line 518: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/HigherLevelAnalysis/NodeContents.pm -- Around line 395: '=item' outside of any '=over'Around line 480: You forgot a '=back' before '=head2'Around line 508: Expected '=item 2'Around line 513: Expected '=item 3'Around line 518: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/HigherLevelAnalysis/NodeValue.pm -- Around line 374: '=item' outside of any '=over'Around line 459: You forgot a '=back' before '=head2'Around line 631: Expected '=item 2'Around line 636: Expected '=item 3'Around line 641: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Identifiable.pm -- Around line 409: '=item' outside of any '=over'Around line 494: You forgot a '=back' before '=head2'Around line 666: Expected '=item 2'Around line 671: Expected '=item 3'Around line 676: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/ConcentrationUnit.pm -- Around line 288: '=item' outside of any '=over'Around line 373: You forgot a '=back' before '=head2'Around line 549: Expected '=item 2'Around line 554: Expected '=item 3'Around line 559: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/DistanceUnit.pm -- Around line 283: '=item' outside of any '=over'Around line 368: You forgot a '=back' before '=head2'Around line 544: Expected '=item 2'Around line 549: Expected '=item 3'Around line 554: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/MassUnit.pm -- Around line 283: '=item' outside of any '=over'Around line 368: You forgot a '=back' before '=head2'Around line 544: Expected '=item 2'Around line 549: Expected '=item 3'Around line 554: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/Measurement.pm -- Around line 336: '=item' outside of any '=over'Around line 421: You forgot a '=back' before '=head2'Around line 745: Expected '=item 2'Around line 750: Expected '=item 3'Around line 755: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/QuantityUnit.pm -- Around line 284: '=item' outside of any '=over'Around line 369: You forgot a '=back' before '=head2'Around line 545: Expected '=item 2'Around line 550: Expected '=item 3'Around line 555: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/TemperatureUnit.pm -- Around line 278: '=item' outside of any '=over'Around line 363: You forgot a '=back' before '=head2'Around line 539: Expected '=item 2'Around line 544: Expected '=item 3'Around line 549: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/TimeUnit.pm -- Around line 284: '=item' outside of any '=over'Around line 369: You forgot a '=back' before '=head2'Around line 545: Expected '=item 2'Around line 550: Expected '=item 3'Around line 555: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/Unit.pm -- Around line 299: '=item' outside of any '=over'Around line 384: You forgot a '=back' before '=head2'Around line 484: Expected '=item 2'Around line 489: Expected '=item 3'Around line 494: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/VolumeUnit.pm -- Around line 284: '=item' outside of any '=over'Around line 369: You forgot a '=back' before '=head2'Around line 545: Expected '=item 2'Around line 550: Expected '=item 3'Around line 555: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/NameValueType.pm -- Around line 293: '=item' outside of any '=over'Around line 378: You forgot a '=back' before '=head2'Around line 622: Expected '=item 2'Around line 627: Expected '=item 3'Around line 632: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/Hardware.pm -- Around line 456: '=item' outside of any '=over'Around line 541: You forgot a '=back' before '=head2'Around line 929: Expected '=item 2'Around line 934: Expected '=item 3'Around line 939: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/HardwareApplication.pm -- Around line 351: '=item' outside of any '=over'Around line 436: You forgot a '=back' before '=head2'Around line 536: Expected '=item 2'Around line 541: Expected '=item 3'Around line 546: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/Parameter.pm -- Around line 382: '=item' outside of any '=over'Around line 467: You forgot a '=back' before '=head2'Around line 639: Expected '=item 2'Around line 644: Expected '=item 3'Around line 649: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/ParameterValue.pm -- Around line 299: '=item' outside of any '=over'Around line 384: You forgot a '=back' before '=head2'Around line 484: Expected '=item 2'Around line 489: Expected '=item 3'Around line 494: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/Parameterizable.pm -- Around line 374: '=item' outside of any '=over'Around line 459: You forgot a '=back' before '=head2'Around line 703: Expected '=item 2'Around line 708: Expected '=item 3'Around line 713: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/ParameterizableApplication.pm -- Around line 348: '=item' outside of any '=over'Around line 433: You forgot a '=back' before '=head2'Around line 461: Expected '=item 2'Around line 466: Expected '=item 3'Around line 471: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/Protocol.pm -- Around line 456: '=item' outside of any '=over'Around line 541: You forgot a '=back' before '=head2'Around line 929: Expected '=item 2'Around line 934: Expected '=item 3'Around line 939: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/ProtocolApplication.pm -- Around line 450: '=item' outside of any '=over'Around line 535: You forgot a '=back' before '=head2'Around line 635: Expected '=item 2'Around line 640: Expected '=item 3'Around line 645: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/Software.pm -- Around line 471: '=item' outside of any '=over'Around line 556: You forgot a '=back' before '=head2'Around line 800: Expected '=item 2'Around line 805: Expected '=item 3'Around line 810: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/SoftwareApplication.pm -- Around line 360: '=item' outside of any '=over'Around line 445: You forgot a '=back' before '=head2'Around line 617: Expected '=item 2'Around line 622: Expected '=item 3'Around line 627: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/ConfidenceIndicator.pm -- Around line 435: '=item' outside of any '=over'Around line 520: You forgot a '=back' before '=head2'Around line 764: Expected '=item 2'Around line 769: Expected '=item 3'Around line 774: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/DerivedSignal.pm -- Around line 390: '=item' outside of any '=over'Around line 475: You forgot a '=back' before '=head2'Around line 719: Expected '=item 2'Around line 724: Expected '=item 3'Around line 729: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/Error.pm -- Around line 403: '=item' outside of any '=over'Around line 488: You forgot a '=back' before '=head2'Around line 732: Expected '=item 2'Around line 737: Expected '=item 3'Around line 742: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/ExpectedValue.pm -- Around line 403: '=item' outside of any '=over'Around line 488: You forgot a '=back' before '=head2'Around line 732: Expected '=item 2'Around line 737: Expected '=item 3'Around line 742: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/Failed.pm -- Around line 390: '=item' outside of any '=over'Around line 475: You forgot a '=back' before '=head2'Around line 719: Expected '=item 2'Around line 724: Expected '=item 3'Around line 729: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/MeasuredSignal.pm -- Around line 390: '=item' outside of any '=over'Around line 475: You forgot a '=back' before '=head2'Around line 719: Expected '=item 2'Around line 724: Expected '=item 3'Around line 729: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/PValue.pm -- Around line 403: '=item' outside of any '=over'Around line 488: You forgot a '=back' before '=head2'Around line 732: Expected '=item 2'Around line 737: Expected '=item 3'Around line 742: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/PresentAbsent.pm -- Around line 390: '=item' outside of any '=over'Around line 475: You forgot a '=back' before '=head2'Around line 719: Expected '=item 2'Around line 724: Expected '=item 3'Around line 729: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/QuantitationType.pm -- Around line 500: '=item' outside of any '=over'Around line 585: You forgot a '=back' before '=head2'Around line 829: Expected '=item 2'Around line 834: Expected '=item 3'Around line 839: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/Ratio.pm -- Around line 390: '=item' outside of any '=over'Around line 475: You forgot a '=back' before '=head2'Around line 719: Expected '=item 2'Around line 724: Expected '=item 3'Around line 729: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/SpecializedQuantitationType.pm -- Around line 390: '=item' outside of any '=over'Around line 475: You forgot a '=back' before '=head2'Around line 719: Expected '=item 2'Around line 724: Expected '=item 3'Around line 729: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/StandardQuantitationType.pm -- Around line 411: '=item' outside of any '=over'Around line 496: You forgot a '=back' before '=head2'Around line 740: Expected '=item 2'Around line 745: Expected '=item 3'Around line 750: Expected '=item 4'

use_strict

Add 'use strict' (or its equivalents) to all modules, or convince us that your favorite module is well-known enough and people can easily see the modules are strictly written.

Error: classes

has_known_license_in_source_file

Add =head1 LICENSE and/or the proper text of the well-known license to the main module in your code.

has_meta_json

Add a META.json to the distribution. Your buildtool should be able to autogenerate it.

meta_yml_declares_perl_version

If you are using Build.PL define the {requires}{perl} = VERSION field. If you are using MakeMaker (Makefile.PL) you should upgrade ExtUtils::MakeMaker to 6.48 and use MIN_PERL_VERSION parameter. Perl::MinimumVersion can help you determine which version of Perl your module needs.

meta_yml_has_license

Define the license if you are using in Build.PL. If you are using MakeMaker (Makefile.PL) you should upgrade to ExtUtils::MakeMaker version 6.31.

proper_libs

Move your *.pm files in a directory named 'lib'. The directory structure should look like 'lib/Your/Module.pm' for a module named 'Your::Module'. If you need to provide additional files, e.g. for testing, that should not be considered for Kwalitee, then you should look at the 'provides' map in META.yml to limit the files scanned; or use the 'no_index' map to exclude parts of the distribution.

Error: MAGE.pm, MAGE/Array.pm, MAGE/Array/Array.pm, MAGE/Array/ArrayGroup.pm, MAGE/Array/ArrayManufacture.pm, MAGE/Array/ArrayManufactureDeviation.pm, MAGE/Array/FeatureDefect.pm, MAGE/Array/Fiducial.pm, MAGE/Array/ManufactureLIMS.pm, MAGE/Array/ManufactureLIMSBiomaterial.pm, MAGE/Array/PositionDelta.pm, MAGE/Array/ZoneDefect.pm, MAGE/ArrayDesign.pm, MAGE/ArrayDesign/ArrayDesign.pm, MAGE/ArrayDesign/CompositeGroup.pm, MAGE/ArrayDesign/DesignElementGroup.pm, MAGE/ArrayDesign/FeatureGroup.pm, MAGE/ArrayDesign/PhysicalArrayDesign.pm, MAGE/ArrayDesign/ReporterGroup.pm, MAGE/ArrayDesign/Zone.pm, MAGE/ArrayDesign/ZoneGroup.pm, MAGE/ArrayDesign/ZoneLayout.pm, MAGE/Association.pm, MAGE/AuditAndSecurity.pm, MAGE/AuditAndSecurity/Audit.pm, MAGE/AuditAndSecurity/Contact.pm, MAGE/AuditAndSecurity/Organization.pm, MAGE/AuditAndSecurity/Person.pm, MAGE/AuditAndSecurity/Security.pm, MAGE/AuditAndSecurity/SecurityGroup.pm, MAGE/BQS.pm, MAGE/BQS/BibliographicReference.pm, MAGE/Base.pm, MAGE/BioAssay.pm, MAGE/BioAssay/BioAssay.pm, MAGE/BioAssay/BioAssayCreation.pm, MAGE/BioAssay/BioAssayTreatment.pm, MAGE/BioAssay/Channel.pm, MAGE/BioAssay/DerivedBioAssay.pm, MAGE/BioAssay/FeatureExtraction.pm, MAGE/BioAssay/Hybridization.pm, MAGE/BioAssay/Image.pm, MAGE/BioAssay/ImageAcquisition.pm, MAGE/BioAssay/MeasuredBioAssay.pm, MAGE/BioAssay/PhysicalBioAssay.pm, MAGE/BioAssayData.pm, MAGE/BioAssayData/BioAssayData.pm, MAGE/BioAssayData/BioAssayDatum.pm, MAGE/BioAssayData/BioAssayDimension.pm, MAGE/BioAssayData/BioAssayMap.pm, MAGE/BioAssayData/BioAssayMapping.pm, MAGE/BioAssayData/BioDataCube.pm, MAGE/BioAssayData/BioDataTuples.pm, MAGE/BioAssayData/BioDataValues.pm, MAGE/BioAssayData/CompositeSequenceDimension.pm, MAGE/BioAssayData/DerivedBioAssayData.pm, MAGE/BioAssayData/DesignElementDimension.pm, MAGE/BioAssayData/DesignElementMap.pm, MAGE/BioAssayData/DesignElementMapping.pm, MAGE/BioAssayData/FeatureDimension.pm, MAGE/BioAssayData/MeasuredBioAssayData.pm, MAGE/BioAssayData/QuantitationTypeDimension.pm, MAGE/BioAssayData/QuantitationTypeMap.pm, MAGE/BioAssayData/QuantitationTypeMapping.pm, MAGE/BioAssayData/ReporterDimension.pm, MAGE/BioAssayData/Transformation.pm, MAGE/BioEvent.pm, MAGE/BioEvent/BioEvent.pm, MAGE/BioEvent/Map.pm, MAGE/BioMaterial.pm, MAGE/BioMaterial/BioMaterial.pm, MAGE/BioMaterial/BioMaterialMeasurement.pm, MAGE/BioMaterial/BioSample.pm, MAGE/BioMaterial/BioSource.pm, MAGE/BioMaterial/Compound.pm, MAGE/BioMaterial/CompoundMeasurement.pm, MAGE/BioMaterial/LabeledExtract.pm, MAGE/BioMaterial/Treatment.pm, MAGE/BioSequence.pm, MAGE/BioSequence/BioSequence.pm, MAGE/BioSequence/SeqFeature.pm, MAGE/BioSequence/SeqFeatureLocation.pm, MAGE/BioSequence/SequencePosition.pm, MAGE/Describable.pm, MAGE/Description.pm, MAGE/Description/Database.pm, MAGE/Description/DatabaseEntry.pm, MAGE/Description/Description.pm, MAGE/Description/ExternalReference.pm, MAGE/Description/OntologyEntry.pm, MAGE/DesignElement.pm, MAGE/DesignElement/CompositeCompositeMap.pm, MAGE/DesignElement/CompositePosition.pm, MAGE/DesignElement/CompositeSequence.pm, MAGE/DesignElement/DesignElement.pm, MAGE/DesignElement/Feature.pm, MAGE/DesignElement/FeatureInformation.pm, MAGE/DesignElement/FeatureLocation.pm, MAGE/DesignElement/FeatureReporterMap.pm, MAGE/DesignElement/MismatchInformation.pm, MAGE/DesignElement/Position.pm, MAGE/DesignElement/Reporter.pm, MAGE/DesignElement/ReporterCompositeMap.pm, MAGE/DesignElement/ReporterPosition.pm, MAGE/Experiment.pm, MAGE/Experiment/Experiment.pm, MAGE/Experiment/ExperimentDesign.pm, MAGE/Experiment/ExperimentalFactor.pm, MAGE/Experiment/FactorValue.pm, MAGE/Extendable.pm, MAGE/HigherLevelAnalysis.pm, MAGE/HigherLevelAnalysis/BioAssayDataCluster.pm, MAGE/HigherLevelAnalysis/Node.pm, MAGE/HigherLevelAnalysis/NodeContents.pm, MAGE/HigherLevelAnalysis/NodeValue.pm, MAGE/Identifiable.pm, MAGE/Measurement.pm, MAGE/Measurement/ConcentrationUnit.pm, MAGE/Measurement/DistanceUnit.pm, MAGE/Measurement/MassUnit.pm, MAGE/Measurement/Measurement.pm, MAGE/Measurement/QuantityUnit.pm, MAGE/Measurement/TemperatureUnit.pm, MAGE/Measurement/TimeUnit.pm, MAGE/Measurement/Unit.pm, MAGE/Measurement/VolumeUnit.pm, MAGE/NameValueType.pm, MAGE/Protocol.pm, MAGE/Protocol/Hardware.pm, MAGE/Protocol/HardwareApplication.pm, MAGE/Protocol/Parameter.pm, MAGE/Protocol/ParameterValue.pm, MAGE/Protocol/Parameterizable.pm, MAGE/Protocol/ParameterizableApplication.pm, MAGE/Protocol/Protocol.pm, MAGE/Protocol/ProtocolApplication.pm, MAGE/Protocol/Software.pm, MAGE/Protocol/SoftwareApplication.pm, MAGE/QuantitationType.pm, MAGE/QuantitationType/ConfidenceIndicator.pm, MAGE/QuantitationType/DerivedSignal.pm, MAGE/QuantitationType/Error.pm, MAGE/QuantitationType/ExpectedValue.pm, MAGE/QuantitationType/Failed.pm, MAGE/QuantitationType/MeasuredSignal.pm, MAGE/QuantitationType/PValue.pm, MAGE/QuantitationType/PresentAbsent.pm, MAGE/QuantitationType/QuantitationType.pm, MAGE/QuantitationType/Ratio.pm, MAGE/QuantitationType/SpecializedQuantitationType.pm, MAGE/QuantitationType/StandardQuantitationType.pm, classes.pm

use_warnings

Add 'use warnings' (or its equivalents) to all modules (this will require perl > 5.6), or convince us that your favorite module is well-known enough and people can easily see the modules warn when something bad happens.

Error: Bio::MAGE, Bio::MAGE::Array, Bio::MAGE::Array::Array, Bio::MAGE::Array::ArrayGroup, Bio::MAGE::Array::ArrayManufacture, Bio::MAGE::Array::ArrayManufactureDeviation, Bio::MAGE::Array::FeatureDefect, Bio::MAGE::Array::Fiducial, Bio::MAGE::Array::ManufactureLIMS, Bio::MAGE::Array::ManufactureLIMSBiomaterial, Bio::MAGE::Array::PositionDelta, Bio::MAGE::Array::ZoneDefect, Bio::MAGE::ArrayDesign, Bio::MAGE::ArrayDesign::ArrayDesign, Bio::MAGE::ArrayDesign::CompositeGroup, Bio::MAGE::ArrayDesign::DesignElementGroup, Bio::MAGE::ArrayDesign::FeatureGroup, Bio::MAGE::ArrayDesign::PhysicalArrayDesign, Bio::MAGE::ArrayDesign::ReporterGroup, Bio::MAGE::ArrayDesign::Zone, Bio::MAGE::ArrayDesign::ZoneGroup, Bio::MAGE::ArrayDesign::ZoneLayout, Bio::MAGE::Association, Bio::MAGE::AuditAndSecurity, Bio::MAGE::AuditAndSecurity::Audit, Bio::MAGE::AuditAndSecurity::Contact, Bio::MAGE::AuditAndSecurity::Organization, Bio::MAGE::AuditAndSecurity::Person, Bio::MAGE::AuditAndSecurity::Security, Bio::MAGE::AuditAndSecurity::SecurityGroup, Bio::MAGE::BQS, Bio::MAGE::BQS::BibliographicReference, Bio::MAGE::Base, Bio::MAGE::BioAssay, Bio::MAGE::BioAssay::BioAssay, Bio::MAGE::BioAssay::BioAssayCreation, Bio::MAGE::BioAssay::BioAssayTreatment, Bio::MAGE::BioAssay::Channel, Bio::MAGE::BioAssay::DerivedBioAssay, Bio::MAGE::BioAssay::FeatureExtraction, Bio::MAGE::BioAssay::Hybridization, Bio::MAGE::BioAssay::Image, Bio::MAGE::BioAssay::ImageAcquisition, Bio::MAGE::BioAssay::MeasuredBioAssay, Bio::MAGE::BioAssay::PhysicalBioAssay, Bio::MAGE::BioAssayData, Bio::MAGE::BioAssayData::BioAssayData, Bio::MAGE::BioAssayData::BioAssayDatum, Bio::MAGE::BioAssayData::BioAssayDimension, Bio::MAGE::BioAssayData::BioAssayMap, Bio::MAGE::BioAssayData::BioAssayMapping, Bio::MAGE::BioAssayData::BioDataCube, Bio::MAGE::BioAssayData::BioDataTuples, Bio::MAGE::BioAssayData::BioDataValues, Bio::MAGE::BioAssayData::CompositeSequenceDimension, Bio::MAGE::BioAssayData::DerivedBioAssayData, Bio::MAGE::BioAssayData::DesignElementDimension, Bio::MAGE::BioAssayData::DesignElementMap, Bio::MAGE::BioAssayData::DesignElementMapping, Bio::MAGE::BioAssayData::FeatureDimension, Bio::MAGE::BioAssayData::MeasuredBioAssayData, Bio::MAGE::BioAssayData::QuantitationTypeDimension, Bio::MAGE::BioAssayData::QuantitationTypeMap, Bio::MAGE::BioAssayData::QuantitationTypeMapping, Bio::MAGE::BioAssayData::ReporterDimension, Bio::MAGE::BioAssayData::Transformation, Bio::MAGE::BioEvent, Bio::MAGE::BioEvent::BioEvent, Bio::MAGE::BioEvent::Map, Bio::MAGE::BioMaterial, Bio::MAGE::BioMaterial::BioMaterial, Bio::MAGE::BioMaterial::BioMaterialMeasurement, Bio::MAGE::BioMaterial::BioSample, Bio::MAGE::BioMaterial::BioSource, Bio::MAGE::BioMaterial::Compound, Bio::MAGE::BioMaterial::CompoundMeasurement, Bio::MAGE::BioMaterial::LabeledExtract, Bio::MAGE::BioMaterial::Treatment, Bio::MAGE::BioSequence, Bio::MAGE::BioSequence::BioSequence, Bio::MAGE::BioSequence::SeqFeature, Bio::MAGE::BioSequence::SeqFeatureLocation, Bio::MAGE::BioSequence::SequencePosition, Bio::MAGE::Describable, Bio::MAGE::Description, Bio::MAGE::Description::Database, Bio::MAGE::Description::DatabaseEntry, Bio::MAGE::Description::Description, Bio::MAGE::Description::ExternalReference, Bio::MAGE::Description::OntologyEntry, Bio::MAGE::DesignElement, Bio::MAGE::DesignElement::CompositeCompositeMap, Bio::MAGE::DesignElement::CompositePosition, Bio::MAGE::DesignElement::CompositeSequence, Bio::MAGE::DesignElement::DesignElement, Bio::MAGE::DesignElement::Feature, Bio::MAGE::DesignElement::FeatureInformation, Bio::MAGE::DesignElement::FeatureLocation, Bio::MAGE::DesignElement::FeatureReporterMap, Bio::MAGE::DesignElement::MismatchInformation, Bio::MAGE::DesignElement::Position, Bio::MAGE::DesignElement::Reporter, Bio::MAGE::DesignElement::ReporterCompositeMap, Bio::MAGE::DesignElement::ReporterPosition, Bio::MAGE::Experiment, Bio::MAGE::Experiment::Experiment, Bio::MAGE::Experiment::ExperimentDesign, Bio::MAGE::Experiment::ExperimentalFactor, Bio::MAGE::Experiment::FactorValue, Bio::MAGE::Extendable, Bio::MAGE::HigherLevelAnalysis, Bio::MAGE::HigherLevelAnalysis::BioAssayDataCluster, Bio::MAGE::HigherLevelAnalysis::Node, Bio::MAGE::HigherLevelAnalysis::NodeContents, Bio::MAGE::HigherLevelAnalysis::NodeValue, Bio::MAGE::Identifiable, Bio::MAGE::Measurement, Bio::MAGE::Measurement::ConcentrationUnit, Bio::MAGE::Measurement::DistanceUnit, Bio::MAGE::Measurement::MassUnit, Bio::MAGE::Measurement::Measurement, Bio::MAGE::Measurement::QuantityUnit, Bio::MAGE::Measurement::TemperatureUnit, Bio::MAGE::Measurement::TimeUnit, Bio::MAGE::Measurement::Unit, Bio::MAGE::Measurement::VolumeUnit, Bio::MAGE::NameValueType, Bio::MAGE::Protocol, Bio::MAGE::Protocol::Hardware, Bio::MAGE::Protocol::HardwareApplication, Bio::MAGE::Protocol::Parameter, Bio::MAGE::Protocol::ParameterValue, Bio::MAGE::Protocol::Parameterizable, Bio::MAGE::Protocol::ParameterizableApplication, Bio::MAGE::Protocol::Protocol, Bio::MAGE::Protocol::ProtocolApplication, Bio::MAGE::Protocol::Software, Bio::MAGE::Protocol::SoftwareApplication, Bio::MAGE::QuantitationType, Bio::MAGE::QuantitationType::ConfidenceIndicator, Bio::MAGE::QuantitationType::DerivedSignal, Bio::MAGE::QuantitationType::Error, Bio::MAGE::QuantitationType::ExpectedValue, Bio::MAGE::QuantitationType::Failed, Bio::MAGE::QuantitationType::MeasuredSignal, Bio::MAGE::QuantitationType::PValue, Bio::MAGE::QuantitationType::PresentAbsent, Bio::MAGE::QuantitationType::QuantitationType, Bio::MAGE::QuantitationType::Ratio, Bio::MAGE::QuantitationType::SpecializedQuantitationType, Bio::MAGE::QuantitationType::StandardQuantitationType, classes

has_separate_license_file

This is not a critical issue. Currently mainly informative for the CPANTS authors. It might be removed later.

meta_yml_has_provides

Add all modules contained in this distribution to the META.yml field 'provides'. Module::Build or Dist::Zilla::Plugin::MetaProvides do this automatically for you.

meta_yml_has_repository_resource

Add a 'repository' resource to the META.yml via 'meta_add' accessor (for Module::Build) or META_ADD parameter (for ExtUtils::MakeMaker).

Modules

Name Abstract Version View
Bio::MAGE Container module for classes in the MAGE package: MAGE 20030502.3 metacpan
Bio::MAGE::Array Container module for classes in the MAGE package: Array metacpan
Bio::MAGE::Array::Array Class for the MAGE-OM API metacpan
Bio::MAGE::Array::ArrayGroup Class for the MAGE-OM API metacpan
Bio::MAGE::Array::ArrayManufacture Class for the MAGE-OM API metacpan
Bio::MAGE::Array::ArrayManufactureDeviation Class for the MAGE-OM API metacpan
Bio::MAGE::Array::FeatureDefect Class for the MAGE-OM API metacpan
Bio::MAGE::Array::Fiducial Class for the MAGE-OM API metacpan
Bio::MAGE::Array::ManufactureLIMS Class for the MAGE-OM API metacpan
Bio::MAGE::Array::ManufactureLIMSBiomaterial Class for the MAGE-OM API metacpan
Bio::MAGE::Array::PositionDelta Class for the MAGE-OM API metacpan
Bio::MAGE::Array::ZoneDefect Class for the MAGE-OM API metacpan
Bio::MAGE::ArrayDesign Container module for classes in the MAGE package: ArrayDesign metacpan
Bio::MAGE::ArrayDesign::ArrayDesign Class for the MAGE-OM API metacpan
Bio::MAGE::ArrayDesign::CompositeGroup Class for the MAGE-OM API metacpan
Bio::MAGE::ArrayDesign::DesignElementGroup Class for the MAGE-OM API metacpan
Bio::MAGE::ArrayDesign::FeatureGroup Class for the MAGE-OM API metacpan
Bio::MAGE::ArrayDesign::PhysicalArrayDesign Class for the MAGE-OM API metacpan
Bio::MAGE::ArrayDesign::ReporterGroup Class for the MAGE-OM API metacpan
Bio::MAGE::ArrayDesign::Zone Class for the MAGE-OM API metacpan
Bio::MAGE::ArrayDesign::ZoneGroup Class for the MAGE-OM API metacpan
Bio::MAGE::ArrayDesign::ZoneLayout Class for the MAGE-OM API metacpan
Bio::MAGE::Association metacpan
Bio::MAGE::AuditAndSecurity Container module for classes in the MAGE package: AuditAndSecurity metacpan
Bio::MAGE::AuditAndSecurity::Audit Class for the MAGE-OM API metacpan
Bio::MAGE::AuditAndSecurity::Contact Class for the MAGE-OM API metacpan
Bio::MAGE::AuditAndSecurity::Organization Class for the MAGE-OM API metacpan
Bio::MAGE::AuditAndSecurity::Person Class for the MAGE-OM API metacpan
Bio::MAGE::AuditAndSecurity::Security Class for the MAGE-OM API metacpan
Bio::MAGE::AuditAndSecurity::SecurityGroup Class for the MAGE-OM API metacpan
Bio::MAGE::BQS Container module for classes in the MAGE package: BQS metacpan
Bio::MAGE::BQS::BibliographicReference Class for the MAGE-OM API metacpan
Bio::MAGE::Base generic base class metacpan
Bio::MAGE::BioAssay Container module for classes in the MAGE package: BioAssay metacpan
Bio::MAGE::BioAssay::BioAssay Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssay::BioAssayCreation Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssay::BioAssayTreatment Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssay::Channel Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssay::DerivedBioAssay Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssay::FeatureExtraction Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssay::Hybridization Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssay::Image Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssay::ImageAcquisition Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssay::MeasuredBioAssay Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssay::PhysicalBioAssay Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData Container module for classes in the MAGE package: BioAssayData metacpan
Bio::MAGE::BioAssayData::BioAssayData Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::BioAssayDatum Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::BioAssayDimension Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::BioAssayMap Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::BioAssayMapping Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::BioDataCube Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::BioDataTuples Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::BioDataValues Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::CompositeSequenceDimension Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::DerivedBioAssayData Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::DesignElementDimension Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::DesignElementMap Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::DesignElementMapping Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::FeatureDimension Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::MeasuredBioAssayData Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::QuantitationTypeDimension Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::QuantitationTypeMap Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::QuantitationTypeMapping Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::ReporterDimension Class for the MAGE-OM API metacpan
Bio::MAGE::BioAssayData::Transformation Class for the MAGE-OM API metacpan
Bio::MAGE::BioEvent Container module for classes in the MAGE package: BioEvent metacpan
Bio::MAGE::BioEvent::BioEvent Class for the MAGE-OM API metacpan
Bio::MAGE::BioEvent::Map Class for the MAGE-OM API metacpan
Bio::MAGE::BioMaterial Container module for classes in the MAGE package: BioMaterial metacpan
Bio::MAGE::BioMaterial::BioMaterial Class for the MAGE-OM API metacpan
Bio::MAGE::BioMaterial::BioMaterialMeasurement Class for the MAGE-OM API metacpan
Bio::MAGE::BioMaterial::BioSample Class for the MAGE-OM API metacpan
Bio::MAGE::BioMaterial::BioSource Class for the MAGE-OM API metacpan
Bio::MAGE::BioMaterial::Compound Class for the MAGE-OM API metacpan
Bio::MAGE::BioMaterial::CompoundMeasurement Class for the MAGE-OM API metacpan
Bio::MAGE::BioMaterial::LabeledExtract Class for the MAGE-OM API metacpan
Bio::MAGE::BioMaterial::Treatment Class for the MAGE-OM API metacpan
Bio::MAGE::BioSequence Container module for classes in the MAGE package: BioSequence metacpan
Bio::MAGE::BioSequence::BioSequence Class for the MAGE-OM API metacpan
Bio::MAGE::BioSequence::SeqFeature Class for the MAGE-OM API metacpan
Bio::MAGE::BioSequence::SeqFeatureLocation Class for the MAGE-OM API metacpan
Bio::MAGE::BioSequence::SequencePosition Class for the MAGE-OM API metacpan
Bio::MAGE::Describable Class for the MAGE-OM API metacpan
Bio::MAGE::Description Container module for classes in the MAGE package: Description metacpan
Bio::MAGE::Description::Database Class for the MAGE-OM API metacpan
Bio::MAGE::Description::DatabaseEntry Class for the MAGE-OM API metacpan
Bio::MAGE::Description::Description Class for the MAGE-OM API metacpan
Bio::MAGE::Description::ExternalReference Class for the MAGE-OM API metacpan
Bio::MAGE::Description::OntologyEntry Class for the MAGE-OM API metacpan
Bio::MAGE::DesignElement Container module for classes in the MAGE package: DesignElement metacpan
Bio::MAGE::DesignElement::CompositeCompositeMap Class for the MAGE-OM API metacpan
Bio::MAGE::DesignElement::CompositePosition Class for the MAGE-OM API metacpan
Bio::MAGE::DesignElement::CompositeSequence Class for the MAGE-OM API metacpan
Bio::MAGE::DesignElement::DesignElement Class for the MAGE-OM API metacpan
Bio::MAGE::DesignElement::Feature Class for the MAGE-OM API metacpan
Bio::MAGE::DesignElement::FeatureInformation Class for the MAGE-OM API metacpan
Bio::MAGE::DesignElement::FeatureLocation Class for the MAGE-OM API metacpan
Bio::MAGE::DesignElement::FeatureReporterMap Class for the MAGE-OM API metacpan
Bio::MAGE::DesignElement::MismatchInformation Class for the MAGE-OM API metacpan
Bio::MAGE::DesignElement::Position Class for the MAGE-OM API metacpan
Bio::MAGE::DesignElement::Reporter Class for the MAGE-OM API metacpan
Bio::MAGE::DesignElement::ReporterCompositeMap Class for the MAGE-OM API metacpan
Bio::MAGE::DesignElement::ReporterPosition Class for the MAGE-OM API metacpan
Bio::MAGE::Experiment Container module for classes in the MAGE package: Experiment metacpan
Bio::MAGE::Experiment::Experiment Class for the MAGE-OM API metacpan
Bio::MAGE::Experiment::ExperimentDesign Class for the MAGE-OM API metacpan
Bio::MAGE::Experiment::ExperimentalFactor Class for the MAGE-OM API metacpan
Bio::MAGE::Experiment::FactorValue Class for the MAGE-OM API metacpan
Bio::MAGE::Extendable Class for the MAGE-OM API metacpan
Bio::MAGE::HigherLevelAnalysis Container module for classes in the MAGE package: HigherLevelAnalysis metacpan
Bio::MAGE::HigherLevelAnalysis::BioAssayDataCluster Class for the MAGE-OM API metacpan
Bio::MAGE::HigherLevelAnalysis::Node Class for the MAGE-OM API metacpan
Bio::MAGE::HigherLevelAnalysis::NodeContents Class for the MAGE-OM API metacpan
Bio::MAGE::HigherLevelAnalysis::NodeValue Class for the MAGE-OM API metacpan
Bio::MAGE::Identifiable Class for the MAGE-OM API metacpan
Bio::MAGE::Measurement Container module for classes in the MAGE package: Measurement metacpan
Bio::MAGE::Measurement::ConcentrationUnit Class for the MAGE-OM API metacpan
Bio::MAGE::Measurement::DistanceUnit Class for the MAGE-OM API metacpan
Bio::MAGE::Measurement::MassUnit Class for the MAGE-OM API metacpan
Bio::MAGE::Measurement::Measurement Class for the MAGE-OM API metacpan
Bio::MAGE::Measurement::QuantityUnit Class for the MAGE-OM API metacpan
Bio::MAGE::Measurement::TemperatureUnit Class for the MAGE-OM API metacpan
Bio::MAGE::Measurement::TimeUnit Class for the MAGE-OM API metacpan
Bio::MAGE::Measurement::Unit Class for the MAGE-OM API metacpan
Bio::MAGE::Measurement::VolumeUnit Class for the MAGE-OM API metacpan
Bio::MAGE::NameValueType Class for the MAGE-OM API metacpan
Bio::MAGE::Protocol Container module for classes in the MAGE package: Protocol metacpan
Bio::MAGE::Protocol::Hardware Class for the MAGE-OM API metacpan
Bio::MAGE::Protocol::HardwareApplication Class for the MAGE-OM API metacpan
Bio::MAGE::Protocol::Parameter Class for the MAGE-OM API metacpan
Bio::MAGE::Protocol::ParameterValue Class for the MAGE-OM API metacpan
Bio::MAGE::Protocol::Parameterizable Class for the MAGE-OM API metacpan
Bio::MAGE::Protocol::ParameterizableApplication Class for the MAGE-OM API metacpan
Bio::MAGE::Protocol::Protocol Class for the MAGE-OM API metacpan
Bio::MAGE::Protocol::ProtocolApplication Class for the MAGE-OM API metacpan
Bio::MAGE::Protocol::Software Class for the MAGE-OM API metacpan
Bio::MAGE::Protocol::SoftwareApplication Class for the MAGE-OM API metacpan
Bio::MAGE::QuantitationType Container module for classes in the MAGE package: QuantitationType metacpan
Bio::MAGE::QuantitationType::ConfidenceIndicator Class for the MAGE-OM API metacpan
Bio::MAGE::QuantitationType::DerivedSignal Class for the MAGE-OM API metacpan
Bio::MAGE::QuantitationType::Error Class for the MAGE-OM API metacpan
Bio::MAGE::QuantitationType::ExpectedValue Class for the MAGE-OM API metacpan
Bio::MAGE::QuantitationType::Failed Class for the MAGE-OM API metacpan
Bio::MAGE::QuantitationType::MeasuredSignal Class for the MAGE-OM API metacpan
Bio::MAGE::QuantitationType::PValue Class for the MAGE-OM API metacpan
Bio::MAGE::QuantitationType::PresentAbsent Class for the MAGE-OM API metacpan
Bio::MAGE::QuantitationType::QuantitationType Class for the MAGE-OM API metacpan
Bio::MAGE::QuantitationType::Ratio Class for the MAGE-OM API metacpan
Bio::MAGE::QuantitationType::SpecializedQuantitationType Class for the MAGE-OM API metacpan
Bio::MAGE::QuantitationType::StandardQuantitationType Class for the MAGE-OM API metacpan

Provides

Name File View
Bio::MAGE::Association::End MAGE/Association.pm metacpan

Other Files

ChangeLog metacpan
MANIFEST metacpan
META.yml metacpan
Makefile.PL metacpan