Bio-MLST-Check

Metadata

Analyzed metadata and errors of Bio-MLST-Check.

{
   "abstracts_in_pod" : {
      "Bio::MLST::Blast::BlastN" : "Wrapper around NCBI BlastN",
      "Bio::MLST::Blast::Database" : "Wrapper around NCBIs makeblastdb command",
      "Bio::MLST::CDC::Convert" : "Take in a fasta file of emmST sequences and convert it into an MLST format",
      "Bio::MLST::Check" : "Multilocus sequence type checking using blast",
      "Bio::MLST::CheckMultipleSpecies" : "High throughput multilocus sequence typing (MLST) checking against several MLST databases.",
      "Bio::MLST::CompareAlleles" : "Get a list of matching alleles between the sequence and database",
      "Bio::MLST::DatabaseSettings" : "Read in an XML file of settings and return a hash with the values.",
      "Bio::MLST::Databases" : "List available MLST databases",
      "Bio::MLST::Download::Database" : "Represents a single genus-species database on a single species",
      "Bio::MLST::Download::Databases" : "Represents multiple databases of species",
      "Bio::MLST::Download::Downloadable" : "Moose Role to download everything data",
      "Bio::MLST::NormaliseFasta" : "Take in a Fasta file, check for invalid characters and build a corrected file if needed. ",
      "Bio::MLST::OutputFasta" : "Take in two hashes, both containing sequence names and sequences and output fasta files.",
      "Bio::MLST::ProcessFasta" : "Take in a fasta file, lookup the MLST database and create relevant files.",
      "Bio::MLST::SearchForFiles" : "Take in a species name and get the allele and profile files.",
      "Bio::MLST::SequenceType" : "Take in a list of matched alleles and look up the sequence type from the profile.",
      "Bio::MLST::Spreadsheet::File" : "Create a file representation of the ST results for multiple fasta files.",
      "Bio::MLST::Spreadsheet::Row" : "Create a row representation of the ST results for a single fasta file.",
      "Bio::MLST::Types" : "Moose types to use for validation.",
      "Bio::MLST::Validate::Executable" : "Validates the executable is available in the path before running it.",
      "Bio::MLST::Validate::File" : "Check to see if a file exists. For validation when classes have input files.",
      "Bio::MLST::Validate::Resource" : "Check to see if a file exists or if a uri is valid. For validation when classes have input files which may be local or on the web."
   },
   "author" : "AJPAGE",
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