Kwalitee Issues

has_license_in_source_file

Add =head1 LICENSE and the text of the license to the main module in your code.

use_strict

Add 'use strict' (or its equivalents) to all modules, or convince us that your favorite module is well-known enough and people can easily see the modules are strictly written.

Error: Bio::DB::Bam::Pileup, Bio::DB::Sam::SamToGBrowse

has_known_license_in_source_file

Add =head1 LICENSE and/or the proper text of the well-known license to the main module in your code.

use_warnings

Add 'use warnings' (or its equivalents) to all modules (this will require perl > 5.6), or convince us that your favorite module is well-known enough and people can easily see the modules warn when something bad happens.

Error: Bio::DB::Bam::AlignWrapper, Bio::DB::Bam::FetchIterator, Bio::DB::Bam::Pileup, Bio::DB::Bam::PileupWrapper, Bio::DB::Bam::Query, Bio::DB::Bam::ReadIterator, Bio::DB::Bam::Target, Bio::DB::Sam::Constants, Bio::DB::Sam::SamToGBrowse, Bio::DB::Sam::Segment::Iterator

meta_yml_has_repository_resource

Add a 'repository' resource to the META.yml via 'meta_add' accessor (for Module::Build) or META_ADD parameter (for ExtUtils::MakeMaker).

Modules

Name Abstract Version View
Bio::DB::Bam metacpan
Bio::DB::Bam::AlignWrapper Add high-level methods to Bio::DB::Bam::Alignment metacpan
Bio::DB::Bam::Alignment The SAM/BAM alignment object metacpan
Bio::DB::Bam::FetchIterator metacpan
Bio::DB::Bam::Pileup Object passed to pileup() callback metacpan
Bio::DB::Bam::PileupWrapper Add high-level methods to Bio::DB::Bam::Pileup metacpan
Bio::DB::Bam::Query Object representing the query portion of a BAM/SAM alignment metacpan
Bio::DB::Bam::ReadIterator metacpan
Bio::DB::Bam::SplitAlignmentPart metacpan
Bio::DB::Bam::Target Object representing the query portion of a BAM/SAM alignment in NATIVE alignment metacpan
Bio::DB::Sam Read SAM/BAM database files 1.43 metacpan
Bio::DB::Sam::Constants Constants for use with SAM/BAM metacpan
Bio::DB::Sam::Fai metacpan
Bio::DB::Sam::SamToGBrowse metacpan
Bio::DB::Sam::Segment metacpan
Bio::DB::Sam::Segment::Iterator metacpan
Bio::SeqFeature::Coverage metacpan

Other Files

Build.PL metacpan
Changes metacpan
MANIFEST metacpan
META.json metacpan
META.yml metacpan
README metacpan