Bio_AssemblyImprovement

Metadata

Analyzed metadata and errors of Bio_AssemblyImprovement.

{
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      "Bio::AssemblyImprovement" : "Improve an assembly by scaffolding, contig ordering and gap closing.",
      "Bio::AssemblyImprovement::Abacas::DelimiterRole" : "Moose Role for putting in delimiters for Abacas to join up contigs",
      "Bio::AssemblyImprovement::Abacas::Iterative" : "Iteratively run abacas to order contigs",
      "Bio::AssemblyImprovement::Abacas::Main" : "Wrapper script for Abacas, just runs it in a separate directory.",
      "Bio::AssemblyImprovement::FillGaps::GapFiller::Config" : "Create the config file thats used to drive GapFiller",
      "Bio::AssemblyImprovement::FillGaps::GapFiller::Iterative" : "Iteratively close gaps",
      "Bio::AssemblyImprovement::FillGaps::GapFiller::Main" : "Run a single iteration of gapfiller",
      "Bio::AssemblyImprovement::Scaffold::Descaffold" : "Given a fasta file as input, output a descaffolded multi-fasta file.",
      "Bio::AssemblyImprovement::Scaffold::SSpace::Config" : "Create the config file thats used to drive SSpace",
      "Bio::AssemblyImprovement::Scaffold::SSpace::Iterative" : "Iteratively run SSpace.",
      "Bio::AssemblyImprovement::Scaffold::SSpace::Main" : "Run one iteration of SSpace",
      "Bio::AssemblyImprovement::Scaffold::SSpace::OutputFilenameRole" : "Role for handling output filenames",
      "Bio::AssemblyImprovement::Scaffold::SSpace::PreprocessInputFiles" : "Make sure the input files are in the correct format, and paths are resolved. ",
      "Bio::AssemblyImprovement::Scaffold::SSpace::TempDirectoryRole" : "Role for handling temp directories",
      "Bio::AssemblyImprovement::Validate::Executable" : "Validates the executable is available in the path before running it."
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