Bio-Das-ProServer 2.11 Deleted
Kwalitee Issues
- main_module_version_matches_dist_version
-
Make sure that the main module name and version are the same of the distribution.
- meta_yml_declares_perl_version
-
If you are using Build.PL define the {requires}{perl} = VERSION field. If you are using MakeMaker (Makefile.PL) you should upgrade ExtUtils::MakeMaker to 6.48 and use MIN_PERL_VERSION parameter. Perl::MinimumVersion can help you determine which version of Perl your module needs.
- has_meta_json
-
Add a META.json to the distribution. Your buildtool should be able to autogenerate it.
- no_unauthorized_packages
-
Ask the owner of the distribution (the one who released it first, or the one who is designated in x_authority) to give you a (co-)maintainer's permission.
Error:
- Bio::Das::ProServer::Config
- Bio::Das::ProServer::SourceAdaptor
- Bio::Das::ProServer::SourceAdaptor::Transport::bioseqio
- Bio::Das::ProServer::SourceAdaptor::Transport::dbi
- Bio::Das::ProServer::SourceAdaptor::Transport::file
- Bio::Das::ProServer::SourceAdaptor::Transport::generic
- Bio::Das::ProServer::SourceAdaptor::Transport::getz
- Bio::Das::ProServer::SourceAdaptor::Transport::oracle
- Bio::Das::ProServer::SourceAdaptor::Transport::wgetz
- Bio::Das::ProServer::SourceAdaptor::bioseq
- Bio::Das::ProServer::SourceAdaptor::simple
- consistent_version
-
Split the distribution, or fix the version numbers to make them consistent (use the highest version number to avoid version downgrade).
Error: 453,506,524,528,531,537,544,548,549,558,559,567,569,585,637,651,672
- meta_yml_has_repository_resource
-
Add a 'repository' resource to the META.yml via 'meta_add' accessor (for Module::Build) or META_ADD parameter (for ExtUtils::MakeMaker).
- has_separate_license_file
-
This is not a critical issue. Currently mainly informative for the CPANTS authors. It might be removed later.
Modules
Name | Abstract | Version | View |
---|---|---|---|
Bio::Das::ProServer | 651 | metacpan | |
Bio::Das::ProServer::Authenticator | authenticates DAS requests | 549 | metacpan |
Bio::Das::ProServer::Authenticator::http | authenticates DAS requests by issuing requests to a remote authority | 558 | metacpan |
Bio::Das::ProServer::Authenticator::ip | authenticates DAS requests by IP address | 453 | metacpan |
Bio::Das::ProServer::Config | configuration parsing and hooks | 672 | metacpan |
Bio::Das::ProServer::SourceAdaptor | base class for sources | 637 | metacpan |
Bio::Das::ProServer::SourceAdaptor::Transport::bed12 | DBI-like access to a BED file | 548 | metacpan |
Bio::Das::ProServer::SourceAdaptor::Transport::bioseqio | A ProServer transport module that works off any flat file that Bio::SeqIO supports. | 528 | metacpan |
Bio::Das::ProServer::SourceAdaptor::Transport::csv | Comma-separated-values transport layer | 531 | metacpan |
Bio::Das::ProServer::SourceAdaptor::Transport::dbi | A DBI transport layer (actually customised for MySQL) | 559 | metacpan |
Bio::Das::ProServer::SourceAdaptor::Transport::ensembl | 569 | metacpan | |
Bio::Das::ProServer::SourceAdaptor::Transport::file | 567 | metacpan | |
Bio::Das::ProServer::SourceAdaptor::Transport::generic | A generic transport layer for deriving others from | 528 | metacpan |
Bio::Das::ProServer::SourceAdaptor::Transport::getz | Pulls features over command-line SRS/getz transport | 528 | metacpan |
Bio::Das::ProServer::SourceAdaptor::Transport::oracle | Oracle/DBI transport layer | 528 | metacpan |
Bio::Das::ProServer::SourceAdaptor::Transport::sif | 544 | metacpan | |
Bio::Das::ProServer::SourceAdaptor::Transport::wgetz | A ProServer transport module for wgetz (SRS web access) | 548 | metacpan |
Bio::Das::ProServer::SourceAdaptor::all_in_group | 549 | metacpan | |
Bio::Das::ProServer::SourceAdaptor::bed12 | 0 | metacpan | |
Bio::Das::ProServer::SourceAdaptor::bioseq | A ProServer source adaptor for converting Bio::Seq objects into DAS features. See also "Transport/bioseqio.pm". | 524 | metacpan |
Bio::Das::ProServer::SourceAdaptor::file | adaptor for file-based DAS sources | metacpan | |
Bio::Das::ProServer::SourceAdaptor::grouped_db | 585 | metacpan | |
Bio::Das::ProServer::SourceAdaptor::proxy | 524 | metacpan | |
Bio::Das::ProServer::SourceAdaptor::sif | 537 | metacpan | |
Bio::Das::ProServer::SourceAdaptor::simple | 549 | metacpan | |
Bio::Das::ProServer::SourceAdaptor::simple_interaction | 549 | metacpan | |
Bio::Das::ProServer::SourceAdaptor::simple_volmap | 524 | metacpan | |
Bio::Das::ProServer::SourceAdaptor::simpledb | Builds simple DAS features from a database | 524 | metacpan |
Bio::Das::ProServer::SourceAdaptor::styletest | 548 | metacpan | |
Bio::Das::ProServer::SourceHydra | A runtime factory for B::D::P::SourceAdaptors | 549 | metacpan |
Bio::Das::ProServer::SourceHydra::dbi | A database-backed implementation of B::D::P::SourceHydra | 559 | metacpan |
Bio::Das::ProServer::SourceHydra::sql | A database-backed implementation of B::D::P::SourceHydra | 506 | metacpan |