Bio-MUST-Apps-FortyTwo 0.190820 Deleted
Files
- Changes
- INSTALL
- LICENSE
- MANIFEST
- MANIFEST.SKIP
- META.yml
- Makefile.PL
- README
- bin/forty-two.pl
- bin/leel.pl
- bin/yaml-generator-42.pl
- docs/forty-two-manual.pdf
- docs/forty-two-manual.pod
- docs/forty-two-scheme.pdf
- lib/Bio/MUST/Apps/Debrief42.pm
- lib/Bio/MUST/Apps/Debrief42/OrgReport.pm
- lib/Bio/MUST/Apps/Debrief42/RunReport.pm
- lib/Bio/MUST/Apps/Debrief42/TaxReport.pm
- lib/Bio/MUST/Apps/Debrief42/TaxReport/NewSeq.pm
- lib/Bio/MUST/Apps/FortyTwo.pm
- lib/Bio/MUST/Apps/FortyTwo/AliProcessor.pm
- lib/Bio/MUST/Apps/FortyTwo/OrgProcessor.pm
- lib/Bio/MUST/Apps/FortyTwo/RunProcessor.pm
- lib/Bio/MUST/Apps/Leel.pm
- lib/Bio/MUST/Apps/Leel/AliProcessor.pm
- lib/Bio/MUST/Apps/Leel/OrgProcessor.pm
- lib/Bio/MUST/Apps/Leel/RunProcessor.pm
- lib/Bio/MUST/Apps/Roles/AliProcable.pm
- lib/Bio/MUST/Apps/Roles/Configable.pm
- lib/Bio/MUST/Apps/Roles/OrgProcable.pm
- lib/Bio/MUST/Apps/Roles/RunProcable.pm
- lib/Bio/MUST/Apps/SlaveAligner/Local.pm
- t/forty_two.t
- test/MSAs/EOG700KXR-42-nuc-simple.ali
- test/MSAs/EOG700KXR-42-nuc-simple.tax-report
- test/MSAs/EOG700KXR-42-prot-simple.ali
- test/MSAs/EOG700KXR-42-prot-simple.tax-report
- test/MSAs/EOG700KXR-42-prot-tax.ali
- test/MSAs/EOG700KXR-42-prot-tax.tax-report
- test/MSAs/EOG700KXR-my-42-nuc-simple.ali
- test/MSAs/EOG700KXR-my-42-nuc-simple.tax-report
- test/MSAs/EOG700KXR-my-42-prot-simple.ali
- test/MSAs/EOG700KXR-my-42-prot-simple.tax-report
- test/MSAs/EOG700KXR-my-42-prot-tax.ali
- test/MSAs/EOG700KXR-my-42-prot-tax.tax-report
- test/MSAs/EOG700KXR.ali
- test/MSAs/EOG700KXZ-42-nuc-simple.ali
- test/MSAs/EOG700KXZ-42-nuc-simple.tax-report
- test/MSAs/EOG700KXZ-42-prot-simple.ali
- test/MSAs/EOG700KXZ-42-prot-simple.tax-report
- test/MSAs/EOG700KXZ-42-prot-tax.ali
- test/MSAs/EOG700KXZ-42-prot-tax.tax-report
- test/MSAs/EOG700KXZ-my-42-nuc-simple.ali
- test/MSAs/EOG700KXZ-my-42-nuc-simple.tax-report
- test/MSAs/EOG700KXZ-my-42-prot-simple.ali
- test/MSAs/EOG700KXZ-my-42-prot-simple.tax-report
- test/MSAs/EOG700KXZ-my-42-prot-tax.ali
- test/MSAs/EOG700KXZ-my-42-prot-tax.tax-report
- test/MSAs/EOG700KXZ.ali
- test/MSAs/queries.idl
- test/build-42-nuc-simple-yaml.sh
- test/build-42-prot-simple-yaml.sh
- test/build-42-prot-tax-yaml.sh
- test/candidates/genomes/Apis_mellifera.nhr
- test/candidates/genomes/Apis_mellifera.nin
- test/candidates/genomes/Apis_mellifera.nog
- test/candidates/genomes/Apis_mellifera.nsd
- test/candidates/genomes/Apis_mellifera.nsi
- test/candidates/genomes/Apis_mellifera.nsq
- test/candidates/genomes/Harpegnathos_saltator.nhr
- test/candidates/genomes/Harpegnathos_saltator.nin
- test/candidates/genomes/Harpegnathos_saltator.nog
- test/candidates/genomes/Harpegnathos_saltator.nsd
- test/candidates/genomes/Harpegnathos_saltator.nsi
- test/candidates/genomes/Harpegnathos_saltator.nsq
- test/candidates/genomes/nuc-bank-mapper.idm
- test/candidates/proteomes/Apis_mellifera.phr
- test/candidates/proteomes/Apis_mellifera.pin
- test/candidates/proteomes/Apis_mellifera.pog
- test/candidates/proteomes/Apis_mellifera.psd
- test/candidates/proteomes/Apis_mellifera.psi
- test/candidates/proteomes/Apis_mellifera.psq
- test/candidates/proteomes/Harpegnathos_saltator.phr
- test/candidates/proteomes/Harpegnathos_saltator.pin
- test/candidates/proteomes/Harpegnathos_saltator.pog
- test/candidates/proteomes/Harpegnathos_saltator.psd
- test/candidates/proteomes/Harpegnathos_saltator.psi
- test/candidates/proteomes/Harpegnathos_saltator.psq
- test/candidates/proteomes/prot-bank-mapper.idm
- test/config-42-nuc-simple-noexo.yaml
- test/config-42-nuc-simple.yaml
- test/config-42-prot-simple.yaml
- test/config-42-prot-tax.yaml
- test/ref_banks/Camponotus_floridanus.phr
- test/ref_banks/Camponotus_floridanus.pin
- test/ref_banks/Camponotus_floridanus.psd
- test/ref_banks/Camponotus_floridanus.psi
- test/ref_banks/Camponotus_floridanus.psq
- test/ref_banks/Nasonia_vitripennis.phr
- test/ref_banks/Nasonia_vitripennis.pin
- test/ref_banks/Nasonia_vitripennis.psd
- test/ref_banks/Nasonia_vitripennis.psi
- test/ref_banks/Nasonia_vitripennis.psq
- test/ref_banks/Tribolium_castaneum.phr
- test/ref_banks/Tribolium_castaneum.pin
- test/ref_banks/Tribolium_castaneum.psd
- test/ref_banks/Tribolium_castaneum.psi
- test/ref_banks/Tribolium_castaneum.psq
- test/ref_banks/ref-bank-mapper.idm
- test/t.debug.log
- test/t.org.log
- test/taxdump-mini/cachedb.bin
- test/tfl-my-42.ali
- test/tfl-my-42.tax-report
- test/tfl.ali
- test/tfl.para