CracTools 1.21
- Released by
- JAUDOUX
- Version
- Release Date
- 2015-07-29
- Kwalitee
- 143.75
- Core Kwalitee
- 93.75
- LINKS
CracTools 1.21
Kwalitee Issues
- has_changelog
-
Add a Changelog (best named 'Changes') to the distribution. It should list at least major changes implemented in newer versions.
- use_strict
-
Add 'use strict' (or its equivalents) to all modules, or convince us that your favorite module is well-known enough and people can easily see the modules are strictly written.
Error: CracTools, CracTools::App::Command
- meta_yml_declares_perl_version
-
If you are using Build.PL define the {requires}{perl} = VERSION field. If you are using MakeMaker (Makefile.PL) you should upgrade ExtUtils::MakeMaker to 6.48 and use MIN_PERL_VERSION parameter. Perl::MinimumVersion can help you determine which version of Perl your module needs.
- has_meta_json
-
Add a META.json to the distribution. Your buildtool should be able to autogenerate it.
- use_warnings
-
Add 'use warnings' (or its equivalents) to all modules, or convince us that your favorite module is well-known enough and people can easily see the modules warn when something bad happens.
Error: CracTools, CracTools::App::Command, CracTools::BitVector
- meta_yml_has_provides
-
Add all modules contained in this distribution to the META.yml field 'provides'. Module::Build or Dist::Zilla::Plugin::MetaProvides do this automatically for you.
- meta_yml_has_repository_resource
-
Add a 'repository' resource to the META.yml via 'meta_add' accessor (for Module::Build) or META_ADD parameter (for ExtUtils::MakeMaker).
Modules
| Name | Abstract | Version | View |
|---|---|---|---|
| CracTools | A set of tools designed to extract data from CRAC's SAM files and to provide annotations. | 1.21 | metacpan |
| CracTools::Annotator | Generic annotation base on CracTools::GFF::Query::File | 1.21 | metacpan |
| CracTools::App | CracTools App::Cmd | 1.21 | metacpan |
| CracTools::App::Command | base class for cractools commands | 1.21 | metacpan |
| CracTools::App::Command::Extract | 1.21 | metacpan | |
| CracTools::App::Command::GtfToGff | 1.21 | metacpan | |
| CracTools::BitVector | Full Perl BitVector implementation | 1.21 | metacpan |
| CracTools::Config | Manage and access CracTools configuration file | 1.21 | metacpan |
| CracTools::Const | Constants for the CracTools-core | 1.21 | metacpan |
| CracTools::GFF::Annotation | Parse GFF lines. | 1.21 | metacpan |
| CracTools::GenomeMask | A bit vector mask over the whole genome | 1.21 | metacpan |
| CracTools::Interval::Query | Store and query genomics intervals. | 1.21 | metacpan |
| CracTools::Interval::Query::File | Acts like CracTools::Interval::Query but read interval from files and return lines of the file matching the query. | 1.21 | metacpan |
| CracTools::Output | A module to manage CracTools output files. | 1.21 | metacpan |
| CracTools::SAMReader | An easy to use tool to read files in SAM format. | 1.21 | metacpan |
| CracTools::SAMReader::SAMline | The object for manipulation a SAM line. | 1.21 | metacpan |
| CracTools::Utils | A set of useful functions | 1.21 | metacpan |