Bio-GMOD 0.028
- Released by
- TWH
- Version
- Release Date
- 2005-07-08
- Kwalitee
- 140.62
- Core Kwalitee
- 93.75
- LINKS
Bio-GMOD 0.028 Latest
Kwalitee Issues
- use_strict
-
Add 'use strict' (or its equivalents) to all modules, or convince us that your favorite module is well-known enough and people can easily see the modules are strictly written.
Error: Bio::GMOD::Admin::Archive, Bio::GMOD::Admin::Archive, GuessDirectories
- no_pod_errors
-
Remove the POD errors. You can check for POD errors automatically by including Test::Pod to your test suite.
Error: Bio-GMOD-0.028/GMOD/Admin/Archive/WormBase.pm -- Around line 40: You forgot a '=back' before '=head1' Around line 50: '=item' outside of any '=over' Around line 270: You forgot a '=back' before '=head1' Bio-GMOD-0.028/GMOD/Admin/Archive.pm -- Around line 40: You forgot a '=back' before '=head1' Around line 50: '=item' outside of any '=over' Around line 133: You forgot a '=back' before '=head1' Bio-GMOD-0.028/GMOD/Admin/Monitor/blat.pm -- Around line 168: =over is the last thing in the document?! Bio-GMOD-0.028/GMOD/StandardURLs.pm -- Around line 340: '=item' outside of any '=over' =over without closing =back Bio-GMOD-0.028/GMOD/Util/CheckVersions.pm -- Around line 224: You forgot a '=back' before '=head1'
- meta_yml_declares_perl_version
-
If you are using Build.PL define the {requires}{perl} = VERSION field. If you are using MakeMaker (Makefile.PL) you should upgrade ExtUtils::MakeMaker to 6.48 and use MIN_PERL_VERSION parameter. Perl::MinimumVersion can help you determine which version of Perl your module needs.
- has_meta_json
-
Add a META.json to the distribution. Your buildtool should be able to autogenerate it.
- meta_yml_has_license
-
Define the license if you are using in Build.PL. If you are using MakeMaker (Makefile.PL) you should upgrade to ExtUtils::MakeMaker version 6.31.
- use_warnings
-
Add 'use warnings' (or its equivalents) to all modules, or convince us that your favorite module is well-known enough and people can easily see the modules warn when something bad happens.
Error: Bio::GMOD::Adaptor, Bio::GMOD::Adaptor::FlyBase, Bio::GMOD::Adaptor::SGD, Bio::GMOD::Adaptor::WormBase, Bio::GMOD::Adaptor::generic, Bio::GMOD::Admin::Archive, Bio::GMOD::Admin::Archive, Bio::GMOD::Admin::Monitor, Bio::GMOD::Admin::Monitor::WormBase, Bio::GMOD::Admin::Monitor::acedb, Bio::GMOD::Admin::Monitor::blat, Bio::GMOD::Admin::Monitor::httpd, Bio::GMOD::Admin::Monitor::mysqld, Bio::GMOD::Admin::Update, Bio::GMOD::Admin::Update::WormBase, Bio::GMOD::Query, Bio::GMOD::Query::FlyBase, Bio::GMOD::Query::WormBase, Bio::GMOD::StandardURLs, Bio::GMOD::Util::CheckVersions, Bio::GMOD::Util::CheckVersions::WormBase, Bio::GMOD::Util::Mirror, Bio::GMOD::Util::Rearrange, Bio::GMOD::Util::Status, GuessDirectories
- meta_yml_has_provides
-
Add all modules contained in this distribution to the META.yml field 'provides'. Module::Build or Dist::Zilla::Plugin::MetaProvides do this automatically for you.
- meta_yml_has_repository_resource
-
Add a 'repository' resource to the META.yml via 'meta_add' accessor (for Module::Build) or META_ADD parameter (for ExtUtils::MakeMaker).
- has_separate_license_file
-
This is not a critical issue. Currently mainly informative for the CPANTS authors. It might be removed later.
- has_security_doc
-
Add SECURITY(.pod|md). See Software::Security::Policy.
- security_doc_contains_contact
-
Add SECURITY(.pod|md) and add a contact address. See Software::Security::Policy.
- has_contributing_doc
-
Add CONTRIBUTING(.pod|md). See https://docs.github.com/en/communities/setting-up-your-project-for-healthy-contributions/setting-guidelines-for-repository-contributors.
Modules
| Name | Abstract | Version | View |
|---|---|---|---|
| Bio::GMOD | Unified API for Model Organism Databases | 0.028 | metacpan |
| Bio::GMOD::Adaptor | Generic factory for Bio::GMOD::Adaptor::* objects | metacpan | |
| Bio::GMOD::Adaptor::FlyBase | Defaults for programmatically interacting with Wormbase | metacpan | |
| Bio::GMOD::Adaptor::SGD | Defaults for programmatically interacting with SGD | metacpan | |
| Bio::GMOD::Adaptor::WormBase | Defaults for programmatically interacting with Wormbase | metacpan | |
| Bio::GMOD::Adaptor::generic | A generic adaptor for working with multiple MODs simultaneously | metacpan | |
| Bio::GMOD::Admin::Archive | metacpan | ||
| Bio::GMOD::Admin::Monitor | Monitor the status of an installed MOD | metacpan | |
| Bio::GMOD::Admin::Monitor::WormBase | WormBase monitoring utils | metacpan | |
| Bio::GMOD::Admin::Monitor::acedb | Monitor acedb/sgifaceserver | metacpan | |
| Bio::GMOD::Admin::Monitor::blat | Monitor a BLAT server | metacpan | |
| Bio::GMOD::Admin::Monitor::httpd | Monitor httpd | metacpan | |
| Bio::GMOD::Admin::Monitor::mysqld | Monitor mysqld | metacpan | |
| Bio::GMOD::Admin::Update | Generics methods for updating a Bio::GMOD installation | metacpan | |
| Bio::GMOD::Admin::Update::WormBase | Methods for updating a WormBase installation | metacpan | |
| Bio::GMOD::Query | Execute generic queries for different MODs | metacpan | |
| Bio::GMOD::Query::FlyBase | metacpan | ||
| Bio::GMOD::Query::WormBase | Defaults for programmatically interacting with Wormbase | metacpan | |
| Bio::GMOD::StandardURLs | Discover and fetch Standard URLs from MODs | metacpan | |
| Bio::GMOD::Util::CheckVersions | Find current versions of GMOD installations | metacpan | |
| Bio::GMOD::Util::CheckVersions::WormBase | Versioning code for WormBase | metacpan | |
| Bio::GMOD::Util::Mirror | File and directory mirroring | metacpan | |
| Bio::GMOD::Util::Rearrange | Named parameter processing | metacpan | |
| Bio::GMOD::Util::Status | Message processing for Bio::GMOD | metacpan | |
| GuessDirectories | metacpan |