Kwalitee Issues

has_meta_yml

Add a META.yml to the distribution. Your buildtool should be able to autogenerate it.

has_proper_version

Remove all letters from the version number. If you want to mark a release as a developer release, use the scheme 'Module-1.00_01'

buildtool_not_executable

Change the permissions of Build.PL/Makefile.PL to not-executable.

prereq_matches_use

List all used modules in META.yml requires

Error:

  • File::Slurp
  • GD
  • GD::Image
  • Image::ExifTool
  • Module::List
  • Statistics::Descriptive

main_module_version_matches_dist_version

Make sure that the main module name and version are the same of the distribution.

no_pod_errors

Remove the POD errors. You can check for POD errors automatically by including Test::Pod to your test suite.

Error: Microarray-0.45c/lib/Microarray/Analysis/CGH.pm -- Around line 593: You can't have =items (as at line 599) unless the first thing after the =over is an =item

has_meta_json

Add a META.json to the distribution. Your buildtool should be able to autogenerate it.

meta_yml_has_license

Define the license if you are using in Build.PL. If you are using MakeMaker (Makefile.PL) you should upgrade to ExtUtils::MakeMaker version 6.31.

test_prereq_matches_use

List all modules used in the test suite in META.yml test_requires

Error:

  • Test::Deep
  • Test::Differences
  • Test::Group
  • Test::Image::GD

consistent_version

Split the distribution, or fix the version numbers to make them consistent (use the highest version number to avoid version downgrade).

Error: 0.45,1.18,1.23,1.24,1.27,1.4,1.5,1.8,1.9,2.16,2.2,2.20,2.22

has_separate_license_file

This is not a critical issue. Currently mainly informative for the CPANTS authors. It might be removed later.

Modules

Name Abstract Version View
Microarray A Perl module for creating and manipulating DNA Microarray experiment objects 0.45 metacpan
Microarray::Analysis A Perl module for analysing microarray data 1.4 metacpan
Microarray::Analysis::CGH A Perl module for analysing CGH microarray data 1.9 metacpan
Microarray::File Perl objects for handling microarray file formats 1.24 metacpan
Microarray::File::Clone_Locns An object oriented Perl module describing a genomic clone location file 1.8 metacpan
Microarray::File::Data An object oriented Perl module describing microarray data files 2.22 metacpan
Microarray::File::Data::Agilent A Perl module for managing Agilent microarray files 2.2 metacpan
Microarray::File::Data::BlueFuse A Perl module for managing BlueFuse 'output' files 1.23 metacpan
Microarray::File::Data::GenePix A Perl module for managing microarray Axon GenePix data files 1.18 metacpan
Microarray::File::Data::Manor_Output A Perl module for managing 'Manor' clone and spot level output 1.8 metacpan
Microarray::File::Data::Quantarray A Perl module for managing Perkin Elmer 'Scanarray' microarray files 2.20 metacpan
Microarray::File::GAL A Perl module for managing microarray GAL file objects 2.16 metacpan
Microarray::File::Image Perl objects for handling microarray image file formats 1.4 metacpan
Microarray::Image A Perl module for creating microarray data plots 1.27 metacpan
Microarray::Image::CGH_Plot A Perl module for creating CGH-microarray data plots 1.9 metacpan
Microarray::Image::QC_Plots A Perl module for creating microarray QC/QA plots 1.5 metacpan
Microarray::Reporter A Perl module for creating and manipulating microarray reporter objects 1.5 metacpan
Microarray::Spot A Perl module for creating and manipulating microarray spot objects 1.18 metacpan

Provides

Name File View
agilent_file lib/Microarray/File/Data/Agilent.pm metacpan
analysis lib/Microarray/Analysis.pm metacpan
array_reporter lib/Microarray/Reporter.pm metacpan
array_spot lib/Microarray/Spot.pm metacpan
bluefuse_file lib/Microarray/File/Data/BlueFuse.pm metacpan
bluefuse_post_file lib/Microarray/File/Data/BlueFuse.pm metacpan
cgh_analysis lib/Microarray/Analysis/CGH.pm metacpan
cgh_plot lib/Microarray/Image/CGH_Plot.pm metacpan
chromosome_cgh lib/Microarray/Analysis/CGH.pm metacpan
clone_locn_file lib/Microarray/File/Clone_Locns.pm metacpan
data_file lib/Microarray/File/Data.pm metacpan
delimited_file lib/Microarray/File.pm metacpan
gal_file lib/Microarray/File/GAL.pm metacpan
genepix_file lib/Microarray/File/Data/GenePix.pm metacpan
genepix_image lib/Microarray/File/Data/GenePix.pm metacpan
genome_cgh lib/Microarray/Analysis/CGH.pm metacpan
genome_cgh_plot lib/Microarray/Image/CGH_Plot.pm metacpan
heatmap lib/Microarray/Image/QC_Plots.pm metacpan
intensity_heatmap lib/Microarray/Image/QC_Plots.pm metacpan
intensity_scatter lib/Microarray/Image/QC_Plots.pm metacpan
log2_heatmap lib/Microarray/Image/QC_Plots.pm metacpan
log_file lib/Microarray/File.pm metacpan
ma_plot lib/Microarray/Image/QC_Plots.pm metacpan
manor_clone_level lib/Microarray/File/Data/Manor_Output.pm metacpan
microarray lib/Microarray.pm metacpan
microarray_file lib/Microarray/File.pm metacpan
microarray_image_file lib/Microarray/File/Image.pm metacpan
microarray_text_file lib/Microarray/File.pm metacpan
plot lib/Microarray/Image.pm metacpan
quantarray_file lib/Microarray/File/Data/Quantarray.pm metacpan
quantarray_image lib/Microarray/File/Data/Quantarray.pm metacpan
ri_plot lib/Microarray/Image/QC_Plots.pm metacpan
simple_delimited_file lib/Microarray/File.pm metacpan

Other Files

Changes metacpan
MANIFEST metacpan
Makefile.PL metacpan
README metacpan