Errors

consistent_version

0.0101,0.03

manifest_matches_dist

• MANIFEST (155) does not match dist (173):
• Missing in MANIFEST: LICENSE, MANIFEST.bak, META.yml, Makefile.PL, _build/auto_features, _build/build_params, _build/cleanup, _build/config_data, _build/features, _build/magicnum, _build/notes, _build/prereqs, _build/runtime_params, bin/gonzconf, bin/gonzlog, bin/profile_time_space.pl, bin/profile_time_space.plot.R, dist.ini, lib/Bio/Gonzales/Feat/IO/SWISS.pm, lib/Bio/Gonzales/MiniFeat.pm, lib/Bio/Gonzales/Util.pm, lib/Bio/Gonzales/Util/Cerial.pm, lib/Bio/Gonzales/Util/Development.pm, lib/Bio/Gonzales/Util/Development/File.pm, lib/Bio/Gonzales/Util/Development/Module.pm, lib/Bio/Gonzales/Util/File.pm, lib/Bio/Gonzales/Util/Graphics/Color/Generator.pm, lib/Bio/Gonzales/Util/Log.pm, lib/Bio/Gonzales/Util/Math.pm, lib/Bio/Gonzales/Util/Math/kNN/via/Distances.pm, lib/Bio/Gonzales/Util/Role/FileIO.pm, lib/Bio/Gonzales/Util/Text.pm, lib/Bio/Gonzales/Util/YAML.pm, t/Bio-Gonzales-Feat-IO-SWISS.t, t/Bio-Gonzales-Util-Cerial.t, t/Bio-Gonzales-Util-File.t, t/Bio-Gonzales-Util-Log.t, t/Bio-Gonzales-Util-Log_threads.t, t/Bio-Gonzales-Util-Math.t, t/Bio-Gonzales-Util-Text.t, t/Bio-Gonzales-Util-YAML.t, t/Bio-Gonzales-Util.t, t/Math-kNN-via-Distances.t, t/data/uniprot_sprot.dat, t/data/uniprot_trembl.dat
• Missing in Dist: Build.PL, MANIFEST.SKIP, lib/Bargsten/Bio.pm, lib/Bargsten/Bio/Align/Jalview.pm, lib/Bargsten/Bio/Domain/Identification/HMMER.pm, lib/Bargsten/Bio/Domain/Identification/HMMER/SeqMarks.pm, lib/Bargsten/Bio/Domain/Identification/InterProScan.pm, lib/Bargsten/Bio/IDMapIO.pm, lib/Bargsten/Bio/Matrix/IO/mcl.pm, lib/Bargsten/Bio/Phylo/Dendroscope.pm, lib/Bargsten/Bio/PrimarySeqIX.pm, lib/Bargsten/Bio/Role/BioPerl/Constructor.pm, lib/Bargsten/Bio/SearchIO/HMMResult.pm, lib/Bargsten/Bio/Seq/Filter/DuplicateSeqs.pm, lib/Bargsten/Bio/Seq/Validate/fasta.pm, lib/Bargsten/Bio/SeqIO/fasta/idmap.pm, lib/Bargsten/Bio/Tools/SeqMask.pm, lib/Bargsten/Bio/Tools/SeqStats.pm, t/Align-Jalview.t, t/Domain-Identification-HMMER.t, t/Matrix-IO-mcl.t, t/idmapio.t, t/pod-coverage.t, t/pod.t, t/seq-validate-fasta.t, t/seqio-fasta-idmap.t, t/tools-seqmask.t

no_pod_errors

Bio-Gonzales-0.04/lib/Bio/Gonzales.pm -- Around line 48: Unknown directive: =head Around line 62: Unknown directive: =head

prereq_matches_use

• Bio::Graphics
• Bio::Graphics::Glyph::generic
• Bio::Phylo::IO
• Color::Spectrum
• Data::Printer
• IO::Uncompress::Bunzip2
• Log::Log4perl
• Params::Validate
• YAML
• parent

test_prereq_matches_use

• Capture::Tiny
• File::Slurp
• File::Which
• IO::Scalar
• JSON::XS
• Test::Fatal
• YAML::XS

use_strict

Bio::Gonzales::Util::Development::Module

use_warnings

Bio::Gonzales::Graphics::Glyph::colorfulBox, Bio::Gonzales::Util::Development::Module