Bio-Grid-Run-SGE 0.031
Kwalitee Issues
- has_manifest
-
Add a MANIFEST to the distribution. Your buildtool should be able to autogenerate it (eg "make manifest" or "./Build manifest")
- has_changelog
-
Add a Changelog (best named 'Changes') to the distribution. It should list at least major changes implemented in newer versions.
- has_license_in_source_file
-
Add =head1 LICENSE and the text of the license to the main module in your code.
- manifest_matches_dist
-
Run a proper command ("make manifest" or "./Build manifest", maybe with a force option), or use a distribution builder to generate the MANIFEST. Or update MANIFEST manually.
Error: Cannot find MANIFEST in dist.
- prereq_matches_use
-
List all used modules in META.yml requires
Error:
- Params::Validate
- main_module_version_matches_dist_version
-
Make sure that the main module name and version are the same of the distribution.
- meta_yml_declares_perl_version
-
If you are using Build.PL define the {requires}{perl} = VERSION field. If you are using MakeMaker (Makefile.PL) you should upgrade ExtUtils::MakeMaker to 6.48 and use MIN_PERL_VERSION parameter. Perl::MinimumVersion can help you determine which version of Perl your module needs.
- has_meta_json
-
Add a META.json to the distribution. Your buildtool should be able to autogenerate it.
- proper_libs
-
Move your *.pm files in a directory named 'lib'. The directory structure should look like 'lib/Your/Module.pm' for a module named 'Your::Module'. If you need to provide additional files, e.g. for testing, that should not be considered for Kwalitee, then you should look at the 'provides' map in META.yml to limit the files scanned; or use the 'no_index' map to exclude parts of the distribution.
Error: misc/Mtest.pm
- has_known_license_in_source_file
-
Add =head1 LICENSE and/or the proper text of the well-known license to the main module in your code.
- test_prereq_matches_use
-
List all modules used in the test suite in META.yml test_requires
Error:
- Math::Combinatorics
- meta_yml_has_provides
-
Add all modules contained in this distribution to the META.yml field 'provides'. Module::Build or Dist::Zilla::Plugin::MetaProvides do this automatically for you.
- meta_yml_has_repository_resource
-
Add a 'repository' resource to the META.yml via 'meta_add' accessor (for Module::Build) or META_ADD parameter (for ExtUtils::MakeMaker).
Modules
Name | Abstract | Version | View |
---|---|---|---|
Bio::Grid::Run::SGE | Distribute (biological) analyses on the local SGE grid | 0.0101 | metacpan |
Bio::Grid::Run::SGE::Index | Provides an interface to load index classes. | 0.0101 | metacpan |
Bio::Grid::Run::SGE::Index::Dummy | dummy index for testing purposes | 0.0101 | metacpan |
Bio::Grid::Run::SGE::Index::FileList | Creates an index from a list of files | 0.0101 | metacpan |
Bio::Grid::Run::SGE::Index::General | 0.0101 | metacpan | |
Bio::Grid::Run::SGE::Index::List | 0.0101 | metacpan | |
Bio::Grid::Run::SGE::Index::Range | 0.0101 | metacpan | |
Bio::Grid::Run::SGE::Iterator | Provides an interface to load iterator classes. | 0.0101 | metacpan |
Bio::Grid::Run::SGE::Iterator::AllvsAll | Iterate through two indices by combining all elements from the first with the second index. | 0.0101 | metacpan |
Bio::Grid::Run::SGE::Iterator::AllvsAllNoRep | 0.0101 | metacpan | |
Bio::Grid::Run::SGE::Iterator::AvsB | 0.0101 | metacpan | |
Bio::Grid::Run::SGE::Iterator::Consecutive | iterate consecutively through an index | 0.0101 | metacpan |
Bio::Grid::Run::SGE::Iterator::Dummy | 0.0101 | metacpan | |
Bio::Grid::Run::SGE::Iterator::List | 0.0101 | metacpan | |
Bio::Grid::Run::SGE::Iterator::None | 0.0101 | metacpan | |
Bio::Grid::Run::SGE::Log::Analysis | 0.0101 | metacpan | |
Bio::Grid::Run::SGE::Log::Worker | 0.0101 | metacpan | |
Bio::Grid::Run::SGE::Master | 0.0101 | metacpan | |
Bio::Grid::Run::SGE::Role::Indexable | Basic role for all indices | 0.0101 | metacpan |
Bio::Grid::Run::SGE::Role::Iterable | iterator role/base class | 0.0101 | metacpan |
Bio::Grid::Run::SGE::Util | Utility functions for Bio::Grid::Run::SGE | 0.0101 | metacpan |
Bio::Grid::Run::SGE::Util::Blast | basic blast utitlity functions for cluster-wide operations | 0.0101 | metacpan |
Bio::Grid::Run::SGE::Util::ExampleEnvironment | 0.0101 | metacpan | |
Bio::Grid::Run::SGE::Worker | Run the cluster script | 0.0101 | metacpan |
Mtest | 0.0101 | metacpan |