CPANTS

CLIPSeqTools 0.1.0-TRIAL

Kwalitee Issues

This is not the latest release. The following issues may have already been fixed in the newer releases.

If you use Mac OS X >= 10.6, use gnu tar (/usr/bin/gnutar) to avoid PAX headers. It's also important to rename (shorten) long file names (>= 100 characters) in the distribution.

Error: ./PaxHeaders.2113/CLIPSeqTools-0.1.0,./PaxHeaders.2113/CLIPSeqTools-0.1.0,CLIPSeqTools-0.1.0/PaxHeaders.2113/t,CLIPSeqTools-0.1.0/PaxHeaders.2113/t,CLIPSeqTools-0.1.0/t/PaxHeaders.2113/data,CLIPSeqTools-0.1.0/t/PaxHeaders.2113/data,CLIPSeqTools-0.1.0/t/data/PaxHeaders.2113/alignments2.db,CLIPSeqTools-0.1.0/t/data/PaxHeaders.2113/alignments2.db,CLIPSeqTools-0.1.0/t/data/PaxHeaders.2113/transcripts.gtf,CLIPSeqTools-0.1.0/t/data/PaxHeaders.2113/transcripts.gtf,CLIPSeqTools-0.1.0/t/data/PaxHeaders.2113/alignments1.db,CLIPSeqTools-0.1.0/t/data/PaxHeaders.2113/alignments1.db,CLIPSeqTools-0.1.0/PaxHeaders.2113/LICENSE,CLIPSeqTools-0.1.0/PaxHeaders.2113/LICENSE,CLIPSeqTools-0.1.0/PaxHeaders.2113/META.yml,CLIPSeqTools-0.1.0/PaxHeaders.2113/META.yml,CLIPSeqTools-0.1.0/PaxHeaders.2113/TODO.md,CLIPSeqTools-0.1.0/PaxHeaders.2113/TODO.md,CLIPSeqTools-0.1.0/PaxHeaders.2113/dist.ini,CLIPSeqTools-0.1.0/PaxHeaders.2113/dist.ini,CLIPSeqTools-0.1.0/PaxHeaders.2113/lib,CLIPSeqTools-0.1.0/PaxHeaders.2113/lib,CLIPSeqTools-0.1.0/lib/PaxHeaders.2113/CLIPSeqTools,CLIPSeqTools-0.1.0/lib/PaxHeaders.2113/CLIPSeqTools,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/PlotApp,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/PlotApp,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/distribution_on_introns_exons.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/distribution_on_introns_exons.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/reads_long_gaps_size_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/reads_long_gaps_size_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/size_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/size_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/cluster_size_and_score_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/cluster_size_and_score_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/nucleotide_composition.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/nucleotide_composition.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/conservation_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/conservation_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/distribution_on_genic_elements.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/distribution_on_genic_elements.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/libraries_relative_read_density.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/libraries_relative_read_density.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/scatterplot.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/scatterplot.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/genomic_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PlotApp/PaxHeaders.2113/genomic_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/App.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/App.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/PreprocessApp.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/PreprocessApp.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/Role,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/Role,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Role/PaxHeaders.2113/Option,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Role/PaxHeaders.2113/Option,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Role/Option/PaxHeaders.2113/Library.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Role/Option/PaxHeaders.2113/Library.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Role/Option/PaxHeaders.2113/ReferenceLibrary.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Role/Option/PaxHeaders.2113/ReferenceLibrary.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Role/Option/PaxHeaders.2113/Plot.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Role/Option/PaxHeaders.2113/Plot.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Role/Option/PaxHeaders.2113/Transcripts.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Role/Option/PaxHeaders.2113/Transcripts.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Role/Option/PaxHeaders.2113/OutputPrefix.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Role/Option/PaxHeaders.2113/OutputPrefix.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Role/Option/PaxHeaders.2113/Genes.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Role/Option/PaxHeaders.2113/Genes.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/PlotApp.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/PlotApp.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/CompareApp,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/CompareApp,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/CompareApp/PaxHeaders.2113/libraries_overlap_stats.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/CompareApp/PaxHeaders.2113/libraries_overlap_stats.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/CompareApp/PaxHeaders.2113/libraries_relative_read_density.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/CompareApp/PaxHeaders.2113/libraries_relative_read_density.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/CompareApp/PaxHeaders.2113/all.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/CompareApp/PaxHeaders.2113/all.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/CompareApp/PaxHeaders.2113/compare_counts.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/CompareApp/PaxHeaders.2113/compare_counts.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/CompareApp.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/CompareApp.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/App,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/App,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/distribution_on_introns_exons.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/distribution_on_introns_exons.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/reads_long_gaps_size_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/reads_long_gaps_size_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/count_reads_on_genic_elements.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/count_reads_on_genic_elements.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/size_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/size_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/cluster_size_and_score_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/cluster_size_and_score_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/nucleotide_composition.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/nucleotide_composition.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/genome_coverage.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/genome_coverage.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/conservation_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/conservation_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/distribution_on_genic_elements.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/distribution_on_genic_elements.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/all.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/all.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/nmer_enrichment_over_shuffled.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/nmer_enrichment_over_shuffled.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/genomic_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/App/PaxHeaders.2113/genomic_distribution.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/Tutorial,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/Tutorial,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Tutorial/PaxHeaders.2113/Details.pod,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Tutorial/PaxHeaders.2113/Details.pod,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Tutorial/PaxHeaders.2113/Introduction.pod,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/Tutorial/PaxHeaders.2113/Introduction.pod,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/PreprocessApp,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PaxHeaders.2113/PreprocessApp,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/star_alignment.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/star_alignment.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/cut_adaptor.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/cut_adaptor.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/annotate_with_genic_elements.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/annotate_with_genic_elements.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/annotate_with_file.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/annotate_with_file.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/sam_to_sqlite.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/sam_to_sqlite.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/all.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/all.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/cleanup_alignment.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/cleanup_alignment.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/annotate_with_deletions.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/annotate_with_deletions.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/annotate_with_conservation.pm,CLIPSeqTools-0.1.0/lib/CLIPSeqTools/PreprocessApp/PaxHeaders.2113/annotate_with_conservation.pm,CLIPSeqTools-0.1.0/lib/PaxHeaders.2113/CLIPSeqTools.pm,CLIPSeqTools-0.1.0/lib/PaxHeaders.2113/CLIPSeqTools.pm,CLIPSeqTools-0.1.0/PaxHeaders.2113/Makefile.PL,CLIPSeqTools-0.1.0/PaxHeaders.2113/Makefile.PL,CLIPSeqTools-0.1.0/PaxHeaders.2113/bin,CLIPSeqTools-0.1.0/PaxHeaders.2113/bin,CLIPSeqTools-0.1.0/bin/PaxHeaders.2113/clipseqtools-preprocess,CLIPSeqTools-0.1.0/bin/PaxHeaders.2113/clipseqtools-preprocess,CLIPSeqTools-0.1.0/bin/PaxHeaders.2113/clipseqtools,CLIPSeqTools-0.1.0/bin/PaxHeaders.2113/clipseqtools,CLIPSeqTools-0.1.0/bin/PaxHeaders.2113/clipseqtools-compare,CLIPSeqTools-0.1.0/bin/PaxHeaders.2113/clipseqtools-compare,CLIPSeqTools-0.1.0/bin/PaxHeaders.2113/clipseqtools-plot,CLIPSeqTools-0.1.0/bin/PaxHeaders.2113/clipseqtools-plot,CLIPSeqTools-0.1.0/PaxHeaders.2113/README.md,CLIPSeqTools-0.1.0/PaxHeaders.2113/README.md,CLIPSeqTools-0.1.0/PaxHeaders.2113/META.json,CLIPSeqTools-0.1.0/PaxHeaders.2113/META.json,CLIPSeqTools-0.1.0/PaxHeaders.2113/MANIFEST,CLIPSeqTools-0.1.0/PaxHeaders.2113/MANIFEST

has_changelog

Add a Changelog (best named 'Changes') to the distribution. It should list at least major changes implemented in newer versions.

has_license_in_source_file

Add =head1 LICENSE and the text of the license to the main module in your code.

2 Extra Issues

meta_yml_declares_perl_version: If you are using Build.PL define the {requires}{perl} = VERSION field. If you are using MakeMaker (Makefile.PL) you should upgrade ExtUtils::MakeMaker to 6.48 and use MIN_PERL_VERSION parameter. Perl::MinimumVersion can help you determine which version of Perl your module needs.
has_known_license_in_source_file: Add =head1 LICENSE and/or the proper text of the well-known license to the main module in your code.

4 Experimental Issues

meta_yml_has_provides: Add all modules contained in this distribution to the META.yml field 'provides'. Module::Build or Dist::Zilla::Plugin::MetaProvides do this automatically for you.
has_security_doc: Add SECURITY(.pod|md). See Software::Security::Policy.
security_doc_contains_contact: Add SECURITY(.pod|md) and add a contact address. See Software::Security::Policy.
has_contributing_doc: Add CONTRIBUTING(.pod|md). See https://docs.github.com/en/communities/setting-up-your-project-for-healthy-contributions/setting-guidelines-for-repository-contributors.

Modules

Name	Abstract	Version	View
CLIPSeqTools	A collection of tools for the analysis of CLIP-Seq data.	0.001000	metacpan
CLIPSeqTools::App	Main CLIPSeqTools application with tools for analysis of CLIP-Seq libraries.	0.001000	metacpan
CLIPSeqTools::App::all	Run all clipseqtools analyses	0.001000	metacpan
CLIPSeqTools::App::cluster_size_and_score_distribution	Assemble reads in clusters and measure their size and number of contained reads distribution	0.001000	metacpan
CLIPSeqTools::App::conservation_distribution	Measure reads at each conservation level	0.001000	metacpan
CLIPSeqTools::App::count_reads_on_genic_elements	Count reads on transcripts, genes, exons, introns	0.001000	metacpan
CLIPSeqTools::App::distribution_on_genic_elements	Measure read distribution on 5'UTR, CDS and 3'UTR.	0.001000	metacpan
CLIPSeqTools::App::distribution_on_introns_exons	Measure read distribution on exons and introns.	0.001000	metacpan
CLIPSeqTools::App::genome_coverage	Measure percent of genome covered by reads.	0.001000	metacpan
CLIPSeqTools::App::genomic_distribution	Count reads on genes, repeats, exons, introns, 5'UTRs, ...	0.001000	metacpan
CLIPSeqTools::App::nmer_enrichment_over_shuffled	Measure Nmer enrichment over shuffled reads.	0.001000	metacpan
CLIPSeqTools::App::nucleotide_composition	Measure nucleotide composition along reads.	0.001000	metacpan
CLIPSeqTools::App::reads_long_gaps_size_distribution	Measure size distribution of long alignment gaps produced by a gap aware aligner.	0.001000	metacpan
CLIPSeqTools::App::size_distribution	Measure size distribution for reads.	0.001000	metacpan
CLIPSeqTools::CompareApp	A collection of tools to compare two CLIP-Seq libraries.	0.001000	metacpan
CLIPSeqTools::CompareApp::all	Run all clipseqtools-compare analyses.	0.001000	metacpan
CLIPSeqTools::CompareApp::compare_counts	Compare tables with counts.	0.001000	metacpan
CLIPSeqTools::CompareApp::libraries_overlap_stats	Count reads of library A that overlap reads in reference library B.	0.001000	metacpan
CLIPSeqTools::CompareApp::libraries_relative_read_density	Measure read density around the reads of a reference library	0.001000	metacpan
CLIPSeqTools::PlotApp	Tools to create plots based on the output of CLIPSeqTools applications.	0.001000	metacpan
CLIPSeqTools::PlotApp::cluster_size_and_score_distribution	Create plots for script cluster_size_and_score_distribution.	0.001000	metacpan
CLIPSeqTools::PlotApp::conservation_distribution	Create plots for script conservation_distribution.	0.001000	metacpan
CLIPSeqTools::PlotApp::distribution_on_genic_elements	Create plots for script distribution_on_genic_elements.	0.001000	metacpan
CLIPSeqTools::PlotApp::distribution_on_introns_exons	Create plots for script distribution_on_introns_exons.	0.001000	metacpan
CLIPSeqTools::PlotApp::genomic_distribution	Create plots for script genomic_distribution.	0.001000	metacpan
CLIPSeqTools::PlotApp::libraries_relative_read_density	Create plots for script libraries_relative_read_density.	0.001000	metacpan
CLIPSeqTools::PlotApp::nucleotide_composition	Create plots for script nucleotide_composition.	0.001000	metacpan
CLIPSeqTools::PlotApp::reads_long_gaps_size_distribution	Create plots for script reads_long_gaps_size_distribution.	0.001000	metacpan
CLIPSeqTools::PlotApp::scatterplot	Create scatterplot for two tables.	0.001000	metacpan
CLIPSeqTools::PlotApp::size_distribution	Create plots for script size_distribution.	0.001000	metacpan
CLIPSeqTools::PreprocessApp	Tools to process a fastq file with CLIP-Seq data into a database compatible with clipseqtools.	0.001000	metacpan
CLIPSeqTools::PreprocessApp::all	Run all clipseqtools-preprocess analyses.	0.001000	metacpan
CLIPSeqTools::PreprocessApp::annotate_with_conservation	Annotate alignments in a database table with conservation scores.	0.001000	metacpan
CLIPSeqTools::PreprocessApp::annotate_with_deletions	Annotate alignments in a database table with deletions.	0.001000	metacpan
CLIPSeqTools::PreprocessApp::annotate_with_file	Annotate alignments in a database table with regions from a BED/SAM file.	0.001000	metacpan
CLIPSeqTools::PreprocessApp::annotate_with_genic_elements	Annotate alignments in a database table with genic information.	0.001000	metacpan
CLIPSeqTools::PreprocessApp::cleanup_alignment	Keep a single record for multimappers, sort and collapse similar STAR alignments.	0.001000	metacpan
CLIPSeqTools::PreprocessApp::cut_adaptor	Cut the adaptor sequence from the 3'end of reads.	0.001000	metacpan
CLIPSeqTools::PreprocessApp::sam_to_sqlite	Load a SAM file in an SQLite database.	0.001000	metacpan
CLIPSeqTools::PreprocessApp::star_alignment	Do reads alignment with STAR.	0.001000	metacpan
CLIPSeqTools::Role::Option::Genes	Role to enable reading a GTF file with genes/transcripts from the command line	0.001000	metacpan
CLIPSeqTools::Role::Option::Library	Role to enable reading a library with reads from the command line	0.001000	metacpan
CLIPSeqTools::Role::Option::OutputPrefix	Role to enable output prefix as command line option.	0.001000	metacpan
CLIPSeqTools::Role::Option::Plot	Role to enable plot as command line option	0.001000	metacpan
CLIPSeqTools::Role::Option::ReferenceLibrary	Role to enable reading reference libraries with reads from the command line	0.001000	metacpan
CLIPSeqTools::Role::Option::Transcripts	Role to enable reading a GTF file with transcripts from the command line	0.001000	metacpan

Other Files


MANIFEST	metacpan
META.json	metacpan
META.yml	metacpan
Makefile.PL	metacpan
README.md	metacpan
dist.ini	metacpan