Files

• Changes
• GO/Basic.pm
• GO/Handlers/abstract_prolog_writer.pm
• GO/Handlers/abstract_sql_writer.pm
• GO/Handlers/base.pm
• GO/Handlers/go_def.pm
• GO/Handlers/go_ont.pm
• GO/Handlers/go_xref.pm
• GO/Handlers/godb_prestore.pm
• GO/Handlers/lexanalysis.pm
• GO/Handlers/lexanalysis2sql.pm
• GO/Handlers/obj.pm
• GO/Handlers/obj_storable.pm
• GO/Handlers/obj_yaml.pm
• GO/Handlers/obo.pm
• GO/Handlers/obo_html.pm
• GO/Handlers/obo_sxpr.pm
• GO/Handlers/obo_text.pm
• GO/Handlers/obo_xml.pm
• GO/Handlers/owl.pm
• GO/Handlers/owl_to_obo_text.pm
• GO/Handlers/pathlist.pm
• GO/Handlers/prolog.pm
• GO/Handlers/rdf.pm
• GO/Handlers/summary.pm
• GO/Handlers/sxpr.pm
• GO/Handlers/tbl.pm
• GO/Handlers/text_html.pm
• GO/Handlers/xml.pm
• GO/Handlers/xsl_base.pm
• GO/IO/Analysis.pm
• GO/IO/Blast.pm
• GO/IO/Dotty.pm
• GO/IO/RDFXML.pm
• GO/IO/XML.pm
• GO/Model/Association.pm
• GO/Model/CrossProduct.pm
• GO/Model/Evidence.pm
• GO/Model/GeneProduct.pm
• GO/Model/Graph.pm
• GO/Model/GraphIterator.pm
• GO/Model/GraphNodeInstance.pm
• GO/Model/Modification.pm
• GO/Model/Ontology.pm
• GO/Model/Path.pm
• GO/Model/Property.pm
• GO/Model/Relationship.pm
• GO/Model/Restriction.pm
• GO/Model/Root.pm
• GO/Model/Seq.pm
• GO/Model/Species.pm
• GO/Model/Term.pm
• GO/Model/TreeIterator.pm
• GO/Model/Xref.pm
• GO/ObjCache.pm
• GO/ObjFactory.pm
• GO/Parser.pm
• GO/Parsers/ParserEventNames.pm
• GO/Parsers/base_parser.pm
• GO/Parsers/go_assoc_parser.pm
• GO/Parsers/go_def_parser.pm
• GO/Parsers/go_ont_parser.pm
• GO/Parsers/go_xref_parser.pm
• GO/Parsers/locuslink_parser.pm
• GO/Parsers/mesh_parser.pm
• GO/Parsers/mgi_assoc_parser.pm
• GO/Parsers/ncbi_taxon_names_parser.pm
• GO/Parsers/obj_emitter.pm
• GO/Parsers/obj_storable_parser.pm
• GO/Parsers/obj_yaml_parser.pm
• GO/Parsers/obo_parser.pm
• GO/Parsers/obo_text_parser.pm
• GO/Parsers/obo_xml_parser.pm
• GO/Parsers/owl_parser.pm
• GO/Parsers/unknown_format_parser.pm
• GO/Utils.pm
• GO/xsl/chadoxml_to_oboxml.xsl
• GO/xsl/oboxml_filter.xsl
• GO/xsl/oboxml_to_chadoxml.xsl
• GO/xsl/oboxml_to_dig.xsl
• GO/xsl/oboxml_to_godb_prestore.xsl
• GO/xsl/oboxml_to_obotext.xsl
• GO/xsl/oboxml_to_owl.xsl
• GO/xsl/oboxml_to_racer.xsl
• GO/xsl/oboxml_to_summary_table.xsl
• GO/xsl/owl_to_oboxml.xsl
• INSTALL
• INSTALL.html
• MANIFEST
• META.yml
• Makefile.PL
• README
• create-manifest.sh
• doc/go-perl-doc.html
• doc/go-perl-event-handling.html
• doc/gomodel.dia
• doc/gomodel.png
• doc/map2slim.gif
• doc/stylesheet.css
• go-perl.pod
• scripts/go-apply-xslt
• scripts/go-dag-summary.pl
• scripts/go-export-graph.pl
• scripts/go-export-prolog.pl
• scripts/go-filter-subset.pl
• scripts/go-perl-make-pod-html.pl
• scripts/go-show-assocs-by-node.pl
• scripts/go-show-paths-to-root.pl
• scripts/go-validate-xml
• scripts/go2chadoxml
• scripts/go2error_report
• scripts/go2fmt.pl
• scripts/go2godb_prestore
• scripts/go2obo
• scripts/go2obo_html
• scripts/go2obo_text
• scripts/go2obo_xml
• scripts/go2owl
• scripts/go2pathlist
• scripts/go2prolog
• scripts/go2racer
• scripts/go2rdf
• scripts/go2rdfxml
• scripts/go2summary
• scripts/go2sxpr
• scripts/go2tbl
• scripts/go2text_html
• scripts/go2xml
• scripts/map2slim
• t/data/GO.defs
• t/data/generic.0208
• t/data/go-truncated.obo
• t/data/process.ontology
• t/data/relationship.obo
• t/data/test-function.dat
• t/data/test-gene_association.fb
• t/data/test-go.obo
• t/data/test-nucleolar.obo
• t/data/test2.ontology
• t/data/test_bad_function.dat
• t/t010build.t
• t/t020paths.t
• t/t030detecterror.t
• t/t050oboformat.t
• t/t060oboformat2.t
• t/t070parseannot2obj.t
• t/t080gofmt2.t
• t/t100roundtrip.t
• t/t110basic.t
• t/t120rt.sh
• t/t130relations.t
• t/validate_all.x