Files

• Build.PL
• Changes
• LICENSE
• MANIFEST
• META.json
• META.yml
• README
• lib/Bio/Community.pm
• lib/Bio/Community/Alpha.pm
• lib/Bio/Community/IO.pm
• lib/Bio/Community/IO/Driver/biom.pm
• lib/Bio/Community/IO/Driver/dummy.pm
• lib/Bio/Community/IO/Driver/gaas.pm
• lib/Bio/Community/IO/Driver/generic.pm
• lib/Bio/Community/IO/Driver/qiime.pm
• lib/Bio/Community/IO/Driver/unifrac.pm
• lib/Bio/Community/IO/FormatGuesser.pm
• lib/Bio/Community/Member.pm
• lib/Bio/Community/Meta.pm
• lib/Bio/Community/Meta/Beta.pm
• lib/Bio/Community/Meta/Gamma.pm
• lib/Bio/Community/Role/Classified.pm
• lib/Bio/Community/Role/Described.pm
• lib/Bio/Community/Role/IO.pm
• lib/Bio/Community/Role/Locked.pm
• lib/Bio/Community/Role/PRNG.pm
• lib/Bio/Community/Role/Sequenced.pm
• lib/Bio/Community/Role/Table.pm
• lib/Bio/Community/Role/Weighted.pm
• lib/Bio/Community/TaxonomyUtils.pm
• lib/Bio/Community/Tools/Accumulator.pm
• lib/Bio/Community/Tools/IdConverter.pm
• lib/Bio/Community/Tools/Rarefier.pm
• lib/Bio/Community/Tools/Sampler.pm
• lib/Bio/Community/Tools/ShrapnelCleaner.pm
• lib/Bio/Community/Tools/Summarizer.pm
• lib/Bio/Community/Tools/Transformer.pm
• lib/Bio/Community/Types.pm
• scripts/bc_accumulate
• scripts/bc_add_taxonomy
• scripts/bc_clean_shrapnel
• scripts/bc_convert_files
• scripts/bc_convert_ids
• scripts/bc_correct_misassignments
• scripts/bc_get_info
• scripts/bc_manage_members
• scripts/bc_manage_samples
• scripts/bc_measure_alpha
• scripts/bc_measure_beta
• scripts/bc_rarefy
• scripts/bc_relative_to_absolute
• scripts/bc_remove_unexpected_members
• scripts/bc_summarize
• t/Alpha.t
• t/Community.t
• t/IO.t
• t/IO/Driver/biom.t
• t/IO/Driver/gaas.t
• t/IO/Driver/generic.t
• t/IO/Driver/qiime.t
• t/IO/Driver/unifrac.t
• t/IO/FormatGuesser.t
• t/IO/weights.t
• t/Member.t
• t/Meta.t
• t/Meta/Beta.t
• t/Meta/Gamma.t
• t/Role/Locked.t
• t/Role/PRNG.t
• t/Role/Table.t
• t/Role/TestLocked.pm
• t/Role/TestPRNG.pm
• t/Role/TestTable.pm
• t/Tools/Accumulator.t
• t/Tools/IdConverter.t
• t/Tools/Rarefier.t
• t/Tools/Sampler.t
• t/Tools/ShrapnelCleaner.t
• t/Tools/Summarizer.t
• t/Tools/Transformer.t
• t/data/biom_dups.txt
• t/data/biom_float.txt
• t/data/biom_invalid.txt
• t/data/biom_minimal_dense.txt
• t/data/biom_no_spp.txt
• t/data/biom_rich_sparse.txt
• t/data/blast_tab_usearch.txt
• t/data/gaas_compo.txt
• t/data/gaas_other.txt
• t/data/gaas_seq_compo.txt
• t/data/generic_table.txt
• t/data/generic_table_mac.txt
• t/data/generic_table_win.txt
• t/data/gg_99_otu_map.txt
• t/data/lorem_ipsum.txt
• t/data/qiime_alt_header.txt
• t/data/qiime_single_community.txt
• t/data/qiime_w_bc_ids.txt
• t/data/qiime_w_greengenes_taxo.txt
• t/data/qiime_w_missing.txt
• t/data/qiime_w_no_taxo.txt
• t/data/qiime_w_root.txt
• t/data/qiime_w_silva_taxo_L2.txt
• t/data/qiime_w_silva_taxo_and_dups.txt
• t/data/qiime_w_two_communities.txt
• t/data/rep_set_tax_assignments.txt
• t/data/table.txt
• t/data/table_2.txt
• t/data/table_extra_line.txt
• t/data/table_mac.txt
• t/data/table_win.txt
• t/data/taxonomy/greengenes_taxonomy_16S_candiv_gg_2011_1.txt
• t/data/taxonomy/ncbi_small_names.dmp
• t/data/taxonomy/ncbi_small_nodes.dmp
• t/data/taxonomy/silva_SSURef_108_tax_silva_trunc.fasta
• t/data/to_merge_1.qiime
• t/data/to_merge_2.qiime
• t/data/unifrac_qualitative.txt
• t/data/unifrac_quantitative.txt
• t/data/unifrac_quantitative_tricky.txt
• t/data/weights_1.txt
• t/data/weights_2.txt
• t/data/weights_otuid.txt
• t/data/weights_taxstring.txt
• xt/pod-coverage.t