Errors

no_invalid_versions

• Array/Array.pm: HASH(0x5609d6d26318)
• Array/Array/Array.pm: HASH(0x5609d5f55c28)
• Array/ArrayGroup/ArrayGroup.pm: HASH(0x5609d5d758b0)
• Array/ArrayManufacture/ArrayManufacture.pm: HASH(0x5609d6d103c0)
• Array/ArrayManufactureDeviation/ArrayManufactureDeviation.pm: HASH(0x5609d6d10648)
• Array/FeatureDefect/FeatureDefect.pm: HASH(0x5609d6d233a8)
• Array/Fiducial/Fiducial.pm: HASH(0x5609d6ce57e8)
• Array/ManufactureLIMS/ManufactureLIMS.pm: HASH(0x5609d6d133f8)
• Array/ManufactureLIMSBiomaterial/ManufactureLIMSBiomaterial.pm: HASH(0x5609d6d22fa0)
• Array/PositionDelta/PositionDelta.pm: HASH(0x5609d6d2c150)
• Array/ZoneDefect/ZoneDefect.pm: HASH(0x5609d6cefb58)
• ArrayDesign/ArrayDesign.pm: HASH(0x5609d6d1e218)
• ArrayDesign/ArrayDesign/ArrayDesign.pm: HASH(0x5609d6d1c150)
• ArrayDesign/CompositeGroup/CompositeGroup.pm: HASH(0x5609d6d10ae0)
• ArrayDesign/DesignElementGroup/DesignElementGroup.pm: HASH(0x5609d6d209d8)
• ArrayDesign/FeatureGroup/FeatureGroup.pm: HASH(0x5609d6d10858)
• ArrayDesign/PhysicalArrayDesign/PhysicalArrayDesign.pm: HASH(0x5609d6c217c8)
• ArrayDesign/ReporterGroup/ReporterGroup.pm: HASH(0x5609d6d00438)
• ArrayDesign/Zone/Zone.pm: HASH(0x5609d6d23360)
• ArrayDesign/ZoneGroup/ZoneGroup.pm: HASH(0x5609d6220720)
• ArrayDesign/ZoneLayout/ZoneLayout.pm: HASH(0x5609d61c6a78)
• Association/Association.pm: HASH(0x5609d6d23420)
• AuditAndSecurity/Audit/Audit.pm: HASH(0x5609d6cfde28)
• AuditAndSecurity/AuditAndSecurity.pm: HASH(0x5609d6d23480)
• AuditAndSecurity/Contact/Contact.pm: HASH(0x5609d5edae10)
• AuditAndSecurity/Organization/Organization.pm: HASH(0x5609d5d77580)
• AuditAndSecurity/Person/Person.pm: HASH(0x5609d6d34cf0)
• AuditAndSecurity/Security/Security.pm: HASH(0x5609d624bb58)
• AuditAndSecurity/SecurityGroup/SecurityGroup.pm: HASH(0x5609d6d10cc0)
• BQS/BQS.pm: HASH(0x5609d6d31fc0)
• BQS/BibliographicReference/BibliographicReference.pm: HASH(0x5609d6d12e88)
• Base/Base.pm: HASH(0x5609d6d12d08)
• BioAssay/BioAssay.pm: HASH(0x5609d6d022e0)
• BioAssay/BioAssay/BioAssay.pm: HASH(0x5609d6d23390)
• BioAssay/BioAssayCreation/BioAssayCreation.pm: HASH(0x5609d6d103a8)
• BioAssay/BioAssayTreatment/BioAssayTreatment.pm: HASH(0x5609d61e1db8)
• BioAssay/Channel/Channel.pm: HASH(0x5609d6d02bf8)
• BioAssay/DerivedBioAssay/DerivedBioAssay.pm: HASH(0x5609d6d23678)
• BioAssay/FeatureExtraction/FeatureExtraction.pm: HASH(0x5609d61d4840)
• BioAssay/Hybridization/Hybridization.pm: HASH(0x5609d6d02b08)
• BioAssay/Image/Image.pm: HASH(0x5609d6253c60)
• BioAssay/ImageAcquisition/ImageAcquisition.pm: HASH(0x5609d6d356f8)
• BioAssay/MeasuredBioAssay/MeasuredBioAssay.pm: HASH(0x5609d6d1e350)
• BioAssay/PhysicalBioAssay/PhysicalBioAssay.pm: HASH(0x5609d6d20810)
• BioAssayData/BioAssayData.pm: HASH(0x5609d6d20468)
• BioAssayData/BioAssayData/BioAssayData.pm: HASH(0x5609d5f5b110)
• BioAssayData/BioAssayDatum/BioAssayDatum.pm: HASH(0x5609d61fd978)
• BioAssayData/BioAssayDimension/BioAssayDimension.pm: HASH(0x5609d6d2ca38)
• BioAssayData/BioAssayMap/BioAssayMap.pm: HASH(0x5609d6d12a38)
• BioAssayData/BioAssayMapping/BioAssayMapping.pm: HASH(0x5609d6d1b718)
• BioAssayData/BioDataCube/BioDataCube.pm: HASH(0x5609d6d23468)
• BioAssayData/BioDataTuples/BioDataTuples.pm: HASH(0x5609d6d20dc8)
• BioAssayData/BioDataValues/BioDataValues.pm: HASH(0x5609d6d10d08)
• BioAssayData/CompositeSequenceDimension/CompositeSequenceDimension.pm: HASH(0x5609d5c5bbe0)
• BioAssayData/DerivedBioAssayData/DerivedBioAssayData.pm: HASH(0x5609d61acf20)
• BioAssayData/DesignElementDimension/DesignElementDimension.pm: HASH(0x5609d6d10258)
• BioAssayData/DesignElementMap/DesignElementMap.pm: HASH(0x5609d6d10300)
• BioAssayData/DesignElementMapping/DesignElementMapping.pm: HASH(0x5609d629a078)
• BioAssayData/FeatureDimension/FeatureDimension.pm: HASH(0x5609d5c04e28)
• BioAssayData/MeasuredBioAssayData/MeasuredBioAssayData.pm: HASH(0x5609d6d10d68)
• BioAssayData/QuantitationTypeDimension/QuantitationTypeDimension.pm: HASH(0x5609d6ce7c30)
• BioAssayData/QuantitationTypeMap/QuantitationTypeMap.pm: HASH(0x5609d61c7108)
• BioAssayData/QuantitationTypeMapping/QuantitationTypeMapping.pm: HASH(0x5609d624eac0)
• BioAssayData/ReporterDimension/ReporterDimension.pm: HASH(0x5609d6250358)
• BioAssayData/Transformation/Transformation.pm: HASH(0x5609d61b9838)
• BioEvent/BioEvent.pm: HASH(0x5609d6d207c8)
• BioEvent/BioEvent/BioEvent.pm: HASH(0x5609d6d25f10)
• BioEvent/Map/Map.pm: HASH(0x5609d6d347d0)
• BioMaterial/BioMaterial.pm: HASH(0x5609d6d02070)
• BioMaterial/BioMaterial/BioMaterial.pm: HASH(0x5609d5f88900)
• BioMaterial/BioMaterialMeasurement/BioMaterialMeasurement.pm: HASH(0x5609d61f9d50)
• BioMaterial/BioSample/BioSample.pm: HASH(0x5609d6cf5428)
• BioMaterial/BioSource/BioSource.pm: HASH(0x5609d6d100f0)
• BioMaterial/Compound/Compound.pm: HASH(0x5609d62996e8)
• BioMaterial/CompoundMeasurement/CompoundMeasurement.pm: HASH(0x5609d6d10138)
• BioMaterial/LabeledExtract/LabeledExtract.pm: HASH(0x5609d6d10cd8)
• BioMaterial/Treatment/Treatment.pm: HASH(0x5609d6d2c828)
• BioSequence/BioSequence.pm: HASH(0x5609d5c33120)
• BioSequence/BioSequence/BioSequence.pm: HASH(0x5609d61cf0c8)
• BioSequence/SeqFeature/SeqFeature.pm: HASH(0x5609d6ce4e88)
• BioSequence/SeqFeatureLocation/SeqFeatureLocation.pm: HASH(0x5609d6d12768)
• BioSequence/SequencePosition/SequencePosition.pm: HASH(0x5609d6ce1d20)
• Describable/Describable.pm: HASH(0x5609d6d12c00)
• Description/Database/Database.pm: HASH(0x5609d6d33a70)
• Description/DatabaseEntry/DatabaseEntry.pm: HASH(0x5609d61d0a80)
• Description/Description.pm: HASH(0x5609d62b4090)
• Description/Description/Description.pm: HASH(0x5609d6d05260)
• Description/ExternalReference/ExternalReference.pm: HASH(0x5609d5c32be0)
• Description/OntologyEntry/OntologyEntry.pm: HASH(0x5609d62c4540)
• DesignElement/CompositeCompositeMap/CompositeCompositeMap.pm: HASH(0x5609d61d4978)
• DesignElement/CompositePosition/CompositePosition.pm: HASH(0x5609d6d10e10)
• DesignElement/CompositeSequence/CompositeSequence.pm: HASH(0x5609d5d79748)
• DesignElement/DesignElement.pm: HASH(0x5609d5d09ea8)
• DesignElement/DesignElement/DesignElement.pm: HASH(0x5609d5f55c10)
• DesignElement/Feature/Feature.pm: HASH(0x5609d6d03a70)
• DesignElement/FeatureInformation/FeatureInformation.pm: HASH(0x5609d6cfaa88)
• DesignElement/FeatureLocation/FeatureLocation.pm: HASH(0x5609d61e6998)
• DesignElement/FeatureReporterMap/FeatureReporterMap.pm: HASH(0x5609d6d13428)
• DesignElement/MismatchInformation/MismatchInformation.pm: HASH(0x5609d6d13068)
• DesignElement/Position/Position.pm: HASH(0x5609d6d22e98)
• DesignElement/Reporter/Reporter.pm: HASH(0x5609d6d28190)
• DesignElement/ReporterCompositeMap/ReporterCompositeMap.pm: HASH(0x5609d6d26180)
• DesignElement/ReporterPosition/ReporterPosition.pm: HASH(0x5609d6cf1ef8)
• Experiment/Experiment.pm: HASH(0x5609d626e310)
• Experiment/Experiment/Experiment.pm: HASH(0x5609d4ca3ee0)
• Experiment/ExperimentDesign/ExperimentDesign.pm: HASH(0x5609d6d13338)
• Experiment/ExperimentalFactor/ExperimentalFactor.pm: HASH(0x5609d6d0d9d0)
• Experiment/FactorValue/FactorValue.pm: HASH(0x5609d6d17b90)
• Extendable/Extendable.pm: HASH(0x5609d6d00168)
• HigherLevelAnalysis/BioAssayDataCluster/BioAssayDataCluster.pm: HASH(0x5609d6d327a0)
• HigherLevelAnalysis/HigherLevelAnalysis.pm: HASH(0x5609d62a3118)
• HigherLevelAnalysis/Node/Node.pm: HASH(0x5609d6cead28)
• HigherLevelAnalysis/NodeContents/NodeContents.pm: HASH(0x5609d6ce1ae0)
• HigherLevelAnalysis/NodeValue/NodeValue.pm: HASH(0x5609d6d109a8)
• Identifiable/Identifiable.pm: HASH(0x5609d6cdeac8)
• MAGE.pm: HASH(0x5609d6d109c0)
• Measurement/ConcentrationUnit/ConcentrationUnit.pm: HASH(0x5609d6cf8698)
• Measurement/DistanceUnit/DistanceUnit.pm: HASH(0x5609d6d346c8)
• Measurement/MassUnit/MassUnit.pm: HASH(0x5609d6d12f78)
• Measurement/Measurement.pm: HASH(0x5609d6d01f50)
• Measurement/Measurement/Measurement.pm: HASH(0x5609d6d12e40)
• Measurement/QuantityUnit/QuantityUnit.pm: HASH(0x5609d6d12f60)
• Measurement/TemperatureUnit/TemperatureUnit.pm: HASH(0x5609d6d01fe0)
• Measurement/TimeUnit/TimeUnit.pm: HASH(0x5609d5d616b0)
• Measurement/Unit/Unit.pm: HASH(0x5609d6d03668)
• Measurement/VolumeUnit/VolumeUnit.pm: HASH(0x5609d6d10eb8)
• NameValueType/NameValueType.pm: HASH(0x5609d6d0e0d8)
• Protocol/Hardware/Hardware.pm: HASH(0x5609d6d02418)
• Protocol/HardwareApplication/HardwareApplication.pm: HASH(0x5609d6d1dc90)
• Protocol/Parameter/Parameter.pm: HASH(0x5609d6cfd5e8)
• Protocol/ParameterValue/ParameterValue.pm: HASH(0x5609d6d35800)
• Protocol/Parameterizable/Parameterizable.pm: HASH(0x5609d6d02328)
• Protocol/ParameterizableApplication/ParameterizableApplication.pm: HASH(0x5609d5d795b0)
• Protocol/Protocol.pm: HASH(0x5609d6d13500)
• Protocol/Protocol/Protocol.pm: HASH(0x5609d61bd270)
• Protocol/ProtocolApplication/ProtocolApplication.pm: HASH(0x5609d5edafa8)
• Protocol/Software/Software.pm: HASH(0x5609d6d1be98)
• Protocol/SoftwareApplication/SoftwareApplication.pm: HASH(0x5609d621a270)
• QuantitationType/ConfidenceIndicator/ConfidenceIndicator.pm: HASH(0x5609d62276a8)
• QuantitationType/DerivedSignal/DerivedSignal.pm: HASH(0x5609d6cfdd08)
• QuantitationType/Error/Error.pm: HASH(0x5609d6d1c0d8)
• QuantitationType/ExpectedValue/ExpectedValue.pm: HASH(0x5609d6cfd738)
• QuantitationType/Failed/Failed.pm: HASH(0x5609d61b9e68)
• QuantitationType/MeasuredSignal/MeasuredSignal.pm: HASH(0x5609d6d127c8)
• QuantitationType/PValue/PValue.pm: HASH(0x5609d6ce5710)
• QuantitationType/PresentAbsent/PresentAbsent.pm: HASH(0x5609d5f65ba8)
• QuantitationType/QuantitationType.pm: HASH(0x5609d4c54508)
• QuantitationType/QuantitationType/QuantitationType.pm: HASH(0x5609d6d07648)
• QuantitationType/Ratio/Ratio.pm: HASH(0x5609d62656c8)
• QuantitationType/SpecializedQuantitationType/SpecializedQuantitationType.pm: HASH(0x5609d5f65848)
• QuantitationType/StandardQuantitationType/StandardQuantitationType.pm: HASH(0x5609d61fbca8)

no_pod_errors

Bio-MAGE-2002-09-02_0/Array/Array/Array.pm -- Around line 105: '=item' outside of any '=over' Around line 380: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Array/ArrayGroup/ArrayGroup.pm -- Around line 123: '=item' outside of any '=over' Around line 418: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Array/ArrayManufacture/ArrayManufacture.pm -- Around line 101: '=item' outside of any '=over' Around line 371: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Array/ArrayManufactureDeviation/ArrayManufactureDeviation.pm -- Around line 80: '=item' outside of any '=over' Around line 300: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Array/FeatureDefect/FeatureDefect.pm -- Around line 84: '=item' outside of any '=over' Around line 309: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Array/Fiducial/Fiducial.pm -- Around line 84: '=item' outside of any '=over' Around line 324: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Array/ManufactureLIMS/ManufactureLIMS.pm -- Around line 100: '=item' outside of any '=over' Around line 345: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Array/ManufactureLIMSBiomaterial/ManufactureLIMSBiomaterial.pm -- Around line 84: '=item' outside of any '=over' Around line 344: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Array/PositionDelta/PositionDelta.pm -- Around line 85: '=item' outside of any '=over' Around line 310: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Array/ZoneDefect/ZoneDefect.pm -- Around line 84: '=item' outside of any '=over' Around line 309: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/ArrayDesign/ArrayDesign/ArrayDesign.pm -- Around line 112: '=item' outside of any '=over' Around line 382: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/ArrayDesign/CompositeGroup/CompositeGroup.pm -- Around line 76: '=item' outside of any '=over' Around line 326: You forgot a '=back' before '=head2' Around line 335: You can't have =items (as at line 340) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/ArrayDesign/DesignElementGroup/DesignElementGroup.pm -- Around line 97: '=item' outside of any '=over' Around line 342: You forgot a '=back' before '=head2' Around line 351: You can't have =items (as at line 356) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/ArrayDesign/FeatureGroup/FeatureGroup.pm -- Around line 101: '=item' outside of any '=over' Around line 381: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/ArrayDesign/PhysicalArrayDesign/PhysicalArrayDesign.pm -- Around line 80: '=item' outside of any '=over' Around line 360: You forgot a '=back' before '=head2' Around line 369: You can't have =items (as at line 374) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/ArrayDesign/ReporterGroup/ReporterGroup.pm -- Around line 77: '=item' outside of any '=over' Around line 327: You forgot a '=back' before '=head2' Around line 336: You can't have =items (as at line 341) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/ArrayDesign/Zone/Zone.pm -- Around line 101: '=item' outside of any '=over' Around line 371: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/ArrayDesign/ZoneGroup/ZoneGroup.pm -- Around line 101: '=item' outside of any '=over' Around line 346: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/ArrayDesign/ZoneLayout/ZoneLayout.pm -- Around line 93: '=item' outside of any '=over' Around line 328: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/AuditAndSecurity/Audit/Audit.pm -- Around line 85: '=item' outside of any '=over' Around line 325: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/AuditAndSecurity/Contact/Contact.pm -- Around line 115: '=item' outside of any '=over' Around line 385: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/AuditAndSecurity/Organization/Organization.pm -- Around line 76: '=item' outside of any '=over' Around line 351: You forgot a '=back' before '=head2' Around line 360: You can't have =items (as at line 365) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/AuditAndSecurity/Person/Person.pm -- Around line 89: '=item' outside of any '=over' Around line 379: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/AuditAndSecurity/Security/Security.pm -- Around line 80: '=item' outside of any '=over' Around line 325: You forgot a '=back' before '=head2' Around line 334: You can't have =items (as at line 339) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/AuditAndSecurity/SecurityGroup/SecurityGroup.pm -- Around line 76: '=item' outside of any '=over' Around line 316: You forgot a '=back' before '=head2' Around line 325: You can't have =items (as at line 330) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BQS/BibliographicReference/BibliographicReference.pm -- Around line 118: '=item' outside of any '=over' Around line 398: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Base/Base.pm -- Around line 43: '=item' outside of any '=over' Around line 203: You forgot a '=back' before '=head1' Bio-MAGE-2002-09-02_0/BioAssay/BioAssay/BioAssay.pm -- Around line 98: '=item' outside of any '=over' Around line 343: You forgot a '=back' before '=head2' Around line 352: You can't have =items (as at line 357) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssay/BioAssayCreation/BioAssayCreation.pm -- Around line 95: '=item' outside of any '=over' Around line 350: You forgot a '=back' before '=head2' Around line 359: You can't have =items (as at line 364) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssay/BioAssayTreatment/BioAssayTreatment.pm -- Around line 91: '=item' outside of any '=over' Around line 341: You forgot a '=back' before '=head2' Around line 350: You can't have =items (as at line 355) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssay/Channel/Channel.pm -- Around line 76: '=item' outside of any '=over' Around line 316: You forgot a '=back' before '=head2' Around line 325: You can't have =items (as at line 330) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssay/DerivedBioAssay/DerivedBioAssay.pm -- Around line 84: '=item' outside of any '=over' Around line 344: You forgot a '=back' before '=head2' Around line 353: You can't have =items (as at line 358) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssay/FeatureExtraction/FeatureExtraction.pm -- Around line 80: '=item' outside of any '=over' Around line 330: You forgot a '=back' before '=head2' Around line 339: You can't have =items (as at line 344) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssay/Hybridization/Hybridization.pm -- Around line 69: '=item' outside of any '=over' Around line 324: You forgot a '=back' before '=head2' Around line 333: You can't have =items (as at line 338) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssay/Image/Image.pm -- Around line 86: '=item' outside of any '=over' Around line 336: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioAssay/ImageAcquisition/ImageAcquisition.pm -- Around line 76: '=item' outside of any '=over' Around line 331: You forgot a '=back' before '=head2' Around line 340: You can't have =items (as at line 345) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssay/MeasuredBioAssay/MeasuredBioAssay.pm -- Around line 80: '=item' outside of any '=over' Around line 335: You forgot a '=back' before '=head2' Around line 344: You can't have =items (as at line 349) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssay/PhysicalBioAssay/PhysicalBioAssay.pm -- Around line 84: '=item' outside of any '=over' Around line 344: You forgot a '=back' before '=head2' Around line 353: You can't have =items (as at line 358) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssayData/BioAssayData/BioAssayData.pm -- Around line 106: '=item' outside of any '=over' Around line 366: You forgot a '=back' before '=head2' Around line 375: You can't have =items (as at line 380) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssayData/BioAssayDatum/BioAssayDatum.pm -- Around line 89: '=item' outside of any '=over' Around line 319: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioAssayData/BioAssayDimension/BioAssayDimension.pm -- Around line 76: '=item' outside of any '=over' Around line 316: You forgot a '=back' before '=head2' Around line 325: You can't have =items (as at line 330) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssayData/BioAssayMap/BioAssayMap.pm -- Around line 80: '=item' outside of any '=over' Around line 330: You forgot a '=back' before '=head2' Around line 339: You can't have =items (as at line 344) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssayData/BioAssayMapping/BioAssayMapping.pm -- Around line 76: '=item' outside of any '=over' Around line 291: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioAssayData/BioDataCube/BioDataCube.pm -- Around line 80: '=item' outside of any '=over' Around line 300: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioAssayData/BioDataTuples/BioDataTuples.pm -- Around line 76: '=item' outside of any '=over' Around line 291: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioAssayData/BioDataValues/BioDataValues.pm -- Around line 83: '=item' outside of any '=over' Around line 293: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioAssayData/CompositeSequenceDimension/CompositeSequenceDimension.pm -- Around line 76: '=item' outside of any '=over' Around line 316: You forgot a '=back' before '=head2' Around line 325: You can't have =items (as at line 330) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssayData/DerivedBioAssayData/DerivedBioAssayData.pm -- Around line 76: '=item' outside of any '=over' Around line 341: You forgot a '=back' before '=head2' Around line 350: You can't have =items (as at line 355) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssayData/DesignElementDimension/DesignElementDimension.pm -- Around line 86: '=item' outside of any '=over' Around line 321: You forgot a '=back' before '=head2' Around line 330: You can't have =items (as at line 335) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssayData/DesignElementMap/DesignElementMap.pm -- Around line 86: '=item' outside of any '=over' Around line 326: You forgot a '=back' before '=head2' Around line 335: You can't have =items (as at line 340) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssayData/DesignElementMapping/DesignElementMapping.pm -- Around line 76: '=item' outside of any '=over' Around line 291: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioAssayData/FeatureDimension/FeatureDimension.pm -- Around line 76: '=item' outside of any '=over' Around line 316: You forgot a '=back' before '=head2' Around line 325: You can't have =items (as at line 330) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssayData/MeasuredBioAssayData/MeasuredBioAssayData.pm -- Around line 69: '=item' outside of any '=over' Around line 329: You forgot a '=back' before '=head2' Around line 338: You can't have =items (as at line 343) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssayData/QuantitationTypeDimension/QuantitationTypeDimension.pm -- Around line 76: '=item' outside of any '=over' Around line 316: You forgot a '=back' before '=head2' Around line 325: You can't have =items (as at line 330) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssayData/QuantitationTypeMap/QuantitationTypeMap.pm -- Around line 80: '=item' outside of any '=over' Around line 330: You forgot a '=back' before '=head2' Around line 339: You can't have =items (as at line 344) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssayData/QuantitationTypeMapping/QuantitationTypeMapping.pm -- Around line 76: '=item' outside of any '=over' Around line 291: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioAssayData/ReporterDimension/ReporterDimension.pm -- Around line 76: '=item' outside of any '=over' Around line 316: You forgot a '=back' before '=head2' Around line 325: You can't have =items (as at line 330) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioAssayData/Transformation/Transformation.pm -- Around line 92: '=item' outside of any '=over' Around line 357: You forgot a '=back' before '=head2' Around line 366: You can't have =items (as at line 371) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioEvent/BioEvent/BioEvent.pm -- Around line 102: '=item' outside of any '=over' Around line 342: You forgot a '=back' before '=head2' Around line 351: You can't have =items (as at line 356) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioEvent/Map/Map.pm -- Around line 86: '=item' outside of any '=over' Around line 326: You forgot a '=back' before '=head2' Around line 335: You can't have =items (as at line 340) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioMaterial/BioMaterial/BioMaterial.pm -- Around line 105: '=item' outside of any '=over' Around line 360: You forgot a '=back' before '=head2' Around line 369: You can't have =items (as at line 374) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioMaterial/BioMaterialMeasurement/BioMaterialMeasurement.pm -- Around line 80: '=item' outside of any '=over' Around line 300: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioMaterial/BioSample/BioSample.pm -- Around line 76: '=item' outside of any '=over' Around line 336: You forgot a '=back' before '=head2' Around line 345: You can't have =items (as at line 350) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioMaterial/BioSource/BioSource.pm -- Around line 76: '=item' outside of any '=over' Around line 336: You forgot a '=back' before '=head2' Around line 345: You can't have =items (as at line 350) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioMaterial/Compound/Compound.pm -- Around line 89: '=item' outside of any '=over' Around line 344: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioMaterial/CompoundMeasurement/CompoundMeasurement.pm -- Around line 80: '=item' outside of any '=over' Around line 300: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioMaterial/LabeledExtract/LabeledExtract.pm -- Around line 76: '=item' outside of any '=over' Around line 336: You forgot a '=back' before '=head2' Around line 345: You can't have =items (as at line 350) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/BioMaterial/Treatment/Treatment.pm -- Around line 93: '=item' outside of any '=over' Around line 358: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioSequence/BioSequence/BioSequence.pm -- Around line 113: '=item' outside of any '=over' Around line 398: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioSequence/SeqFeature/SeqFeature.pm -- Around line 81: '=item' outside of any '=over' Around line 316: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioSequence/SeqFeatureLocation/SeqFeatureLocation.pm -- Around line 85: '=item' outside of any '=over' Around line 310: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/BioSequence/SequencePosition/SequencePosition.pm -- Around line 94: '=item' outside of any '=over' Around line 314: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Describable/Describable.pm -- Around line 125: '=item' outside of any '=over' Around line 350: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Description/Database/Database.pm -- Around line 85: '=item' outside of any '=over' Around line 335: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Description/DatabaseEntry/DatabaseEntry.pm -- Around line 93: '=item' outside of any '=over' Around line 328: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Description/Description/Description.pm -- Around line 97: '=item' outside of any '=over' Around line 352: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Description/ExternalReference/ExternalReference.pm -- Around line 88: '=item' outside of any '=over' Around line 318: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Description/OntologyEntry/OntologyEntry.pm -- Around line 93: '=item' outside of any '=over' Around line 328: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/DesignElement/CompositeCompositeMap/CompositeCompositeMap.pm -- Around line 80: '=item' outside of any '=over' Around line 330: You forgot a '=back' before '=head2' Around line 339: You can't have =items (as at line 344) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/DesignElement/CompositePosition/CompositePosition.pm -- Around line 80: '=item' outside of any '=over' Around line 310: You forgot a '=back' before '=head2' Around line 319: You can't have =items (as at line 324) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/DesignElement/CompositeSequence/CompositeSequence.pm -- Around line 85: '=item' outside of any '=over' Around line 340: You forgot a '=back' before '=head2' Around line 349: You can't have =items (as at line 354) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/DesignElement/DesignElement/DesignElement.pm -- Around line 93: '=item' outside of any '=over' Around line 333: You forgot a '=back' before '=head2' Around line 342: You can't have =items (as at line 347) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/DesignElement/Feature/Feature.pm -- Around line 97: '=item' outside of any '=over' Around line 367: You forgot a '=back' before '=head2' Around line 376: You can't have =items (as at line 381) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/DesignElement/FeatureInformation/FeatureInformation.pm -- Around line 80: '=item' outside of any '=over' Around line 300: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/DesignElement/FeatureLocation/FeatureLocation.pm -- Around line 80: '=item' outside of any '=over' Around line 300: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/DesignElement/FeatureReporterMap/FeatureReporterMap.pm -- Around line 80: '=item' outside of any '=over' Around line 330: You forgot a '=back' before '=head2' Around line 339: You can't have =items (as at line 344) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/DesignElement/MismatchInformation/MismatchInformation.pm -- Around line 84: '=item' outside of any '=over' Around line 309: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/DesignElement/Position/Position.pm -- Around line 85: '=item' outside of any '=over' Around line 310: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/DesignElement/Reporter/Reporter.pm -- Around line 90: '=item' outside of any '=over' Around line 350: You forgot a '=back' before '=head2' Around line 359: You can't have =items (as at line 364) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/DesignElement/ReporterCompositeMap/ReporterCompositeMap.pm -- Around line 80: '=item' outside of any '=over' Around line 330: You forgot a '=back' before '=head2' Around line 339: You can't have =items (as at line 344) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/DesignElement/ReporterPosition/ReporterPosition.pm -- Around line 80: '=item' outside of any '=over' Around line 310: You forgot a '=back' before '=head2' Around line 319: You can't have =items (as at line 324) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/Experiment/Experiment/Experiment.pm -- Around line 92: '=item' outside of any '=over' Around line 352: You forgot a '=back' before '=head2' Around line 361: You can't have =items (as at line 366) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/Experiment/ExperimentDesign/ExperimentDesign.pm -- Around line 96: '=item' outside of any '=over' Around line 351: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Experiment/ExperimentalFactor/ExperimentalFactor.pm -- Around line 84: '=item' outside of any '=over' Around line 334: You forgot a '=back' before '=head2' Around line 343: You can't have =items (as at line 348) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/Experiment/FactorValue/FactorValue.pm -- Around line 84: '=item' outside of any '=over' Around line 334: You forgot a '=back' before '=head2' Around line 343: You can't have =items (as at line 348) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/Extendable/Extendable.pm -- Around line 153: '=item' outside of any '=over' Around line 363: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/HigherLevelAnalysis/BioAssayDataCluster/BioAssayDataCluster.pm -- Around line 80: '=item' outside of any '=over' Around line 325: You forgot a '=back' before '=head2' Around line 334: You can't have =items (as at line 339) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/HigherLevelAnalysis/Node/Node.pm -- Around line 84: '=item' outside of any '=over' Around line 324: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/HigherLevelAnalysis/NodeContents/NodeContents.pm -- Around line 84: '=item' outside of any '=over' Around line 324: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/HigherLevelAnalysis/NodeValue/NodeValue.pm -- Around line 93: '=item' outside of any '=over' Around line 328: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Identifiable/Identifiable.pm -- Around line 175: '=item' outside of any '=over' Around line 410: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Measurement/ConcentrationUnit/ConcentrationUnit.pm -- Around line 76: '=item' outside of any '=over' Around line 296: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Measurement/DistanceUnit/DistanceUnit.pm -- Around line 76: '=item' outside of any '=over' Around line 296: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Measurement/MassUnit/MassUnit.pm -- Around line 76: '=item' outside of any '=over' Around line 296: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Measurement/Measurement/Measurement.pm -- Around line 93: '=item' outside of any '=over' Around line 328: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Measurement/QuantityUnit/QuantityUnit.pm -- Around line 76: '=item' outside of any '=over' Around line 296: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Measurement/TemperatureUnit/TemperatureUnit.pm -- Around line 76: '=item' outside of any '=over' Around line 296: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Measurement/TimeUnit/TimeUnit.pm -- Around line 76: '=item' outside of any '=over' Around line 296: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Measurement/Unit/Unit.pm -- Around line 105: '=item' outside of any '=over' Around line 320: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Measurement/VolumeUnit/VolumeUnit.pm -- Around line 76: '=item' outside of any '=over' Around line 296: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/NameValueType/NameValueType.pm -- Around line 74: '=item' outside of any '=over' Around line 299: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Protocol/Hardware/Hardware.pm -- Around line 93: '=item' outside of any '=over' Around line 363: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Protocol/HardwareApplication/HardwareApplication.pm -- Around line 81: '=item' outside of any '=over' Around line 321: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Protocol/Parameter/Parameter.pm -- Around line 80: '=item' outside of any '=over' Around line 325: You forgot a '=back' before '=head2' Around line 334: You can't have =items (as at line 339) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/Protocol/ParameterValue/ParameterValue.pm -- Around line 81: '=item' outside of any '=over' Around line 301: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Protocol/Parameterizable/Parameterizable.pm -- Around line 98: '=item' outside of any '=over' Around line 343: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Protocol/ParameterizableApplication/ParameterizableApplication.pm -- Around line 93: '=item' outside of any '=over' Around line 323: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Protocol/Protocol/Protocol.pm -- Around line 93: '=item' outside of any '=over' Around line 363: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Protocol/ProtocolApplication/ProtocolApplication.pm -- Around line 93: '=item' outside of any '=over' Around line 348: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/Protocol/Software/Software.pm -- Around line 88: '=item' outside of any '=over' Around line 353: You forgot a '=back' before '=head2' Around line 362: You can't have =items (as at line 367) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/Protocol/SoftwareApplication/SoftwareApplication.pm -- Around line 85: '=item' outside of any '=over' Around line 330: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/QuantitationType/ConfidenceIndicator/ConfidenceIndicator.pm -- Around line 93: '=item' outside of any '=over' Around line 363: You forgot a '=back' before '=head2' Around line 372: You can't have =items (as at line 377) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/QuantitationType/DerivedSignal/DerivedSignal.pm -- Around line 69: '=item' outside of any '=over' Around line 334: You forgot a '=back' before '=head2' Around line 343: You can't have =items (as at line 348) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/QuantitationType/Error/Error.pm -- Around line 69: '=item' outside of any '=over' Around line 339: You forgot a '=back' before '=head2' Around line 348: You can't have =items (as at line 353) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/QuantitationType/ExpectedValue/ExpectedValue.pm -- Around line 69: '=item' outside of any '=over' Around line 339: You forgot a '=back' before '=head2' Around line 348: You can't have =items (as at line 353) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/QuantitationType/Failed/Failed.pm -- Around line 69: '=item' outside of any '=over' Around line 334: You forgot a '=back' before '=head2' Around line 343: You can't have =items (as at line 348) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/QuantitationType/MeasuredSignal/MeasuredSignal.pm -- Around line 69: '=item' outside of any '=over' Around line 334: You forgot a '=back' before '=head2' Around line 343: You can't have =items (as at line 348) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/QuantitationType/PValue/PValue.pm -- Around line 69: '=item' outside of any '=over' Around line 339: You forgot a '=back' before '=head2' Around line 348: You can't have =items (as at line 353) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/QuantitationType/PresentAbsent/PresentAbsent.pm -- Around line 69: '=item' outside of any '=over' Around line 334: You forgot a '=back' before '=head2' Around line 343: You can't have =items (as at line 348) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/QuantitationType/QuantitationType/QuantitationType.pm -- Around line 112: '=item' outside of any '=over' Around line 377: You forgot a '=back' before '=head2' Bio-MAGE-2002-09-02_0/QuantitationType/Ratio/Ratio.pm -- Around line 69: '=item' outside of any '=over' Around line 334: You forgot a '=back' before '=head2' Around line 343: You can't have =items (as at line 348) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/QuantitationType/SpecializedQuantitationType/SpecializedQuantitationType.pm -- Around line 69: '=item' outside of any '=over' Around line 334: You forgot a '=back' before '=head2' Around line 343: You can't have =items (as at line 348) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/QuantitationType/StandardQuantitationType/StandardQuantitationType.pm -- Around line 95: '=item' outside of any '=over' Around line 360: You forgot a '=back' before '=head2' Around line 369: You can't have =items (as at line 374) unless the first thing after the =over is an =item Bio-MAGE-2002-09-02_0/SQLUtils/SQLUtils.pm -- Around line 249: '=item' outside of any '=over' =over without closing =back Bio-MAGE-2002-09-02_0/XMLUtils/XMLUtils.pm -- Around line 176: '=item' outside of any '=over' Around line 620: You forgot a '=back' before '=head1'

prereq_matches_use

• Tie::IxHash
• XML::Xerces

use_warnings

Bio::MAGE, Bio::MAGE::Array, Bio::MAGE::Array::Array, Bio::MAGE::Array::ArrayGroup, Bio::MAGE::Array::ArrayManufacture, Bio::MAGE::Array::ArrayManufactureDeviation, Bio::MAGE::Array::FeatureDefect, Bio::MAGE::Array::Fiducial, Bio::MAGE::Array::ManufactureLIMS, Bio::MAGE::Array::ManufactureLIMSBiomaterial, Bio::MAGE::Array::PositionDelta, Bio::MAGE::Array::ZoneDefect, Bio::MAGE::ArrayDesign, Bio::MAGE::ArrayDesign::ArrayDesign, Bio::MAGE::ArrayDesign::CompositeGroup, Bio::MAGE::ArrayDesign::DesignElementGroup, Bio::MAGE::ArrayDesign::FeatureGroup, Bio::MAGE::ArrayDesign::PhysicalArrayDesign, Bio::MAGE::ArrayDesign::ReporterGroup, Bio::MAGE::ArrayDesign::Zone, Bio::MAGE::ArrayDesign::ZoneGroup, Bio::MAGE::ArrayDesign::ZoneLayout, Bio::MAGE::Association, Bio::MAGE::AuditAndSecurity, Bio::MAGE::AuditAndSecurity::Audit, Bio::MAGE::AuditAndSecurity::Contact, Bio::MAGE::AuditAndSecurity::Organization, Bio::MAGE::AuditAndSecurity::Person, Bio::MAGE::AuditAndSecurity::Security, Bio::MAGE::AuditAndSecurity::SecurityGroup, Bio::MAGE::BQS, Bio::MAGE::BQS::BibliographicReference, Bio::MAGE::Base, Bio::MAGE::BioAssay, Bio::MAGE::BioAssay::BioAssay, Bio::MAGE::BioAssay::BioAssayCreation, Bio::MAGE::BioAssay::BioAssayTreatment, Bio::MAGE::BioAssay::Channel, Bio::MAGE::BioAssay::DerivedBioAssay, Bio::MAGE::BioAssay::FeatureExtraction, Bio::MAGE::BioAssay::Hybridization, Bio::MAGE::BioAssay::Image, Bio::MAGE::BioAssay::ImageAcquisition, Bio::MAGE::BioAssay::MeasuredBioAssay, Bio::MAGE::BioAssay::PhysicalBioAssay, Bio::MAGE::BioAssayData, Bio::MAGE::BioAssayData::BioAssayData, Bio::MAGE::BioAssayData::BioAssayDatum, Bio::MAGE::BioAssayData::BioAssayDimension, Bio::MAGE::BioAssayData::BioAssayMap, Bio::MAGE::BioAssayData::BioAssayMapping, Bio::MAGE::BioAssayData::BioDataCube, Bio::MAGE::BioAssayData::BioDataTuples, Bio::MAGE::BioAssayData::BioDataValues, Bio::MAGE::BioAssayData::CompositeSequenceDimension, Bio::MAGE::BioAssayData::DerivedBioAssayData, Bio::MAGE::BioAssayData::DesignElementDimension, Bio::MAGE::BioAssayData::DesignElementMap, Bio::MAGE::BioAssayData::DesignElementMapping, Bio::MAGE::BioAssayData::FeatureDimension, Bio::MAGE::BioAssayData::MeasuredBioAssayData, Bio::MAGE::BioAssayData::QuantitationTypeDimension, Bio::MAGE::BioAssayData::QuantitationTypeMap, Bio::MAGE::BioAssayData::QuantitationTypeMapping, Bio::MAGE::BioAssayData::ReporterDimension, Bio::MAGE::BioAssayData::Transformation, Bio::MAGE::BioEvent, Bio::MAGE::BioEvent::BioEvent, Bio::MAGE::BioEvent::Map, Bio::MAGE::BioMaterial, Bio::MAGE::BioMaterial::BioMaterial, Bio::MAGE::BioMaterial::BioMaterialMeasurement, Bio::MAGE::BioMaterial::BioSample, Bio::MAGE::BioMaterial::BioSource, Bio::MAGE::BioMaterial::Compound, Bio::MAGE::BioMaterial::CompoundMeasurement, Bio::MAGE::BioMaterial::LabeledExtract, Bio::MAGE::BioMaterial::Treatment, Bio::MAGE::BioSequence, Bio::MAGE::BioSequence::BioSequence, Bio::MAGE::BioSequence::SeqFeature, Bio::MAGE::BioSequence::SeqFeatureLocation, Bio::MAGE::BioSequence::SequencePosition, Bio::MAGE::Describable, Bio::MAGE::Description, Bio::MAGE::Description::Database, Bio::MAGE::Description::DatabaseEntry, Bio::MAGE::Description::Description, Bio::MAGE::Description::ExternalReference, Bio::MAGE::Description::OntologyEntry, Bio::MAGE::DesignElement, Bio::MAGE::DesignElement::CompositeCompositeMap, Bio::MAGE::DesignElement::CompositePosition, Bio::MAGE::DesignElement::CompositeSequence, Bio::MAGE::DesignElement::DesignElement, Bio::MAGE::DesignElement::Feature, Bio::MAGE::DesignElement::FeatureInformation, Bio::MAGE::DesignElement::FeatureLocation, Bio::MAGE::DesignElement::FeatureReporterMap, Bio::MAGE::DesignElement::MismatchInformation, Bio::MAGE::DesignElement::Position, Bio::MAGE::DesignElement::Reporter, Bio::MAGE::DesignElement::ReporterCompositeMap, Bio::MAGE::DesignElement::ReporterPosition, Bio::MAGE::Experiment, Bio::MAGE::Experiment::Experiment, Bio::MAGE::Experiment::ExperimentDesign, Bio::MAGE::Experiment::ExperimentalFactor, Bio::MAGE::Experiment::FactorValue, Bio::MAGE::Extendable, Bio::MAGE::HigherLevelAnalysis, Bio::MAGE::HigherLevelAnalysis::BioAssayDataCluster, Bio::MAGE::HigherLevelAnalysis::Node, Bio::MAGE::HigherLevelAnalysis::NodeContents, Bio::MAGE::HigherLevelAnalysis::NodeValue, Bio::MAGE::Identifiable, Bio::MAGE::Measurement, Bio::MAGE::Measurement::ConcentrationUnit, Bio::MAGE::Measurement::DistanceUnit, Bio::MAGE::Measurement::MassUnit, Bio::MAGE::Measurement::Measurement, Bio::MAGE::Measurement::QuantityUnit, Bio::MAGE::Measurement::TemperatureUnit, Bio::MAGE::Measurement::TimeUnit, Bio::MAGE::Measurement::Unit, Bio::MAGE::Measurement::VolumeUnit, Bio::MAGE::NameValueType, Bio::MAGE::Protocol, Bio::MAGE::Protocol::Hardware, Bio::MAGE::Protocol::HardwareApplication, Bio::MAGE::Protocol::Parameter, Bio::MAGE::Protocol::ParameterValue, Bio::MAGE::Protocol::Parameterizable, Bio::MAGE::Protocol::ParameterizableApplication, Bio::MAGE::Protocol::Protocol, Bio::MAGE::Protocol::ProtocolApplication, Bio::MAGE::Protocol::Software, Bio::MAGE::Protocol::SoftwareApplication, Bio::MAGE::QuantitationType, Bio::MAGE::QuantitationType::ConfidenceIndicator, Bio::MAGE::QuantitationType::DerivedSignal, Bio::MAGE::QuantitationType::Error, Bio::MAGE::QuantitationType::ExpectedValue, Bio::MAGE::QuantitationType::Failed, Bio::MAGE::QuantitationType::MeasuredSignal, Bio::MAGE::QuantitationType::PValue, Bio::MAGE::QuantitationType::PresentAbsent, Bio::MAGE::QuantitationType::QuantitationType, Bio::MAGE::QuantitationType::Ratio, Bio::MAGE::QuantitationType::SpecializedQuantitationType, Bio::MAGE::QuantitationType::StandardQuantitationType, Bio::MAGE::SQLWriter, Bio::MAGE::XMLReader