Files

• Changes
• INSTALL
• LICENSE
• MANIFEST
• META.yml
• Makefile.PL
• Manual.pod
• README
• bin/draw_bgc_maps.pl
• bin/explore_bgc_domains.pl
• bin/export_bgc_sql_tables.pl
• bin/extract_bgc_sequences.pl
• bin/generate_bgc_dnz_table.pl
• bin/generate_bgc_report.pl
• data/AT_specificity.hmm
• data/AT_specificity.hmm.h3f
• data/AT_specificity.hmm.h3i
• data/AT_specificity.hmm.h3m
• data/AT_specificity.hmm.h3p
• data/A_specificity.hmm
• data/A_specificity.hmm.h3f
• data/A_specificity.hmm.h3i
• data/A_specificity.hmm.h3m
• data/A_specificity.hmm.h3p
• data/C_subtypes.hmm
• data/C_subtypes.hmm.h3f
• data/C_subtypes.hmm.h3i
• data/C_subtypes.hmm.h3m
• data/C_subtypes.hmm.h3p
• data/KS_subtypes.hmm
• data/KS_subtypes.hmm.h3f
• data/KS_subtypes.hmm.h3i
• data/KS_subtypes.hmm.h3m
• data/KS_subtypes.hmm.h3p
• data/antismash_report.tt
• data/docking.hmm
• data/docking.hmm.h3f
• data/docking.hmm.h3i
• data/docking.hmm.h3m
• data/docking.hmm.h3p
• data/generic_domains.hmm
• data/generic_domains.hmm.h3f
• data/generic_domains.hmm.h3i
• data/generic_domains.hmm.h3m
• data/generic_domains.hmm.h3p
• example_data/Streptomyces_coelicolor_A3_Cluster10.js
• example_data/results/bgc_db
• example_data/results/bgc_db_tables/Clusters
• example_data/results/bgc_db_tables/Domains
• example_data/results/bgc_db_tables/Domains_explus
• example_data/results/bgc_db_tables/Domains_plus
• example_data/results/bgc_db_tables/Genes
• example_data/results/bgc_db_tables/Genes_plus
• example_data/results/bgc_db_tables/Lineages
• example_data/results/bgc_db_tables/Modules
• example_data/results/bgc_db_tables/Modules_plus
• example_data/results/bgc_db_tables/Sequences
• example_data/results/bgc_maps/Cluster1_NRPS.png
• example_data/results/cluster10_denormalized_table.tsv
• example_data/results/cluster10_gene_sequences.fasta
• example_data/results/load_db.sql
• lib/Bio/Palantir.pm
• lib/Bio/Palantir/Explorer.pm
• lib/Bio/Palantir/Explorer/ClusterFasta.pm
• lib/Bio/Palantir/Explorer/GeneFasta.pm
• lib/Bio/Palantir/Parser.pm
• lib/Bio/Palantir/Parser/Cluster.pm
• lib/Bio/Palantir/Parser/Domain.pm
• lib/Bio/Palantir/Parser/Gene.pm
• lib/Bio/Palantir/Parser/Location.pm
• lib/Bio/Palantir/Parser/Motif.pm
• lib/Bio/Palantir/Parser/Qualifier.pm
• lib/Bio/Palantir/Parser/Root.pm
• lib/Bio/Palantir/Refiner.pm
• lib/Bio/Palantir/Refiner/ClusterPlus.pm
• lib/Bio/Palantir/Refiner/DomainPlus.pm
• lib/Bio/Palantir/Refiner/GenePlus.pm
• lib/Bio/Palantir/Roles/Clusterable.pm
• lib/Bio/Palantir/Roles/Domainable.pm
• lib/Bio/Palantir/Roles/Fillable.pm
• lib/Bio/Palantir/Roles/Geneable.pm
• lib/Bio/Palantir/Roles/Modulable.pm
• lib/Bio/Palantir/Roles/Modulable/Module.pm
• t/Parser.t
• t/author-critic.t
• t/author-pod-syntax.t
• t/author-portability.t
• test/Parser_biosynML.xml
• xt/Explorer.t
• xt/Refiner.t
• xtest/Explorer.fasta
• xtest/Refiner_nrps_biosynML.xml
• xtest/Refiner_pks_biosynML.xml
• xtest/Refiner_pks_regions.js