Files

• AUTHORS
• Bio/Factory/EMBOSS.pm
• Bio/Installer/Clustalw.pm
• Bio/Installer/EMBOSS.pm
• Bio/Installer/Generic.pm
• Bio/Installer/Muscle.pm
• Bio/Installer/PAML.pm
• Bio/Installer/Probcons.pm
• Bio/Installer/TCoffee.pm
• Bio/Tools/Run/AbstractRunner.pm
• Bio/Tools/Run/Alignment/Amap.pm
• Bio/Tools/Run/Alignment/Blat.pm
• Bio/Tools/Run/Alignment/Clustalw.pm
• Bio/Tools/Run/Alignment/DBA.pm
• Bio/Tools/Run/Alignment/Exonerate.pm
• Bio/Tools/Run/Alignment/Kalign.pm
• Bio/Tools/Run/Alignment/Lagan.pm
• Bio/Tools/Run/Alignment/MAFFT.pm
• Bio/Tools/Run/Alignment/Muscle.pm
• Bio/Tools/Run/Alignment/Probalign.pm
• Bio/Tools/Run/Alignment/Probcons.pm
• Bio/Tools/Run/Alignment/Sim4.pm
• Bio/Tools/Run/Alignment/StandAloneFasta.pm
• Bio/Tools/Run/Alignment/TCoffee.pm
• Bio/Tools/Run/Analysis.pm
• Bio/Tools/Run/Analysis/soap.pm
• Bio/Tools/Run/AnalysisFactory.pm
• Bio/Tools/Run/AnalysisFactory/Pise.pm
• Bio/Tools/Run/AnalysisFactory/soap.pm
• Bio/Tools/Run/Cap3.pm
• Bio/Tools/Run/Coil.pm
• Bio/Tools/Run/EMBOSSApplication.pm
• Bio/Tools/Run/EMBOSSacd.pm
• Bio/Tools/Run/Eponine.pm
• Bio/Tools/Run/FootPrinter.pm
• Bio/Tools/Run/Genewise.pm
• Bio/Tools/Run/Genscan.pm
• Bio/Tools/Run/Hmmer.pm
• Bio/Tools/Run/JavaRunner.pm
• Bio/Tools/Run/Mdust.pm
• Bio/Tools/Run/Phrap.pm
• Bio/Tools/Run/Phylo/Forester/SDI.pm
• Bio/Tools/Run/Phylo/LVB.pm
• Bio/Tools/Run/Phylo/Molphy/ProtML.pm
• Bio/Tools/Run/Phylo/PAML/Baseml.pm
• Bio/Tools/Run/Phylo/PAML/Codeml.pm
• Bio/Tools/Run/Phylo/PAML/Evolver.pm
• Bio/Tools/Run/Phylo/PAML/Yn00.pm
• Bio/Tools/Run/Phylo/Phylip/Base.pm
• Bio/Tools/Run/Phylo/Phylip/Consense.pm
• Bio/Tools/Run/Phylo/Phylip/DrawGram.pm
• Bio/Tools/Run/Phylo/Phylip/DrawTree.pm
• Bio/Tools/Run/Phylo/Phylip/Neighbor.pm
• Bio/Tools/Run/Phylo/Phylip/PhylipConf.pm
• Bio/Tools/Run/Phylo/Phylip/ProtDist.pm
• Bio/Tools/Run/Phylo/Phylip/ProtPars.pm
• Bio/Tools/Run/Phylo/Phylip/SeqBoot.pm
• Bio/Tools/Run/PiseApplication.pm
• Bio/Tools/Run/PiseApplication/CSR.pm
• Bio/Tools/Run/PiseApplication/Puzzle.pm
• Bio/Tools/Run/PiseApplication/abiview.pm
• Bio/Tools/Run/PiseApplication/addquart.pm
• Bio/Tools/Run/PiseApplication/align2model.pm
• Bio/Tools/Run/PiseApplication/alistat.pm
• Bio/Tools/Run/PiseApplication/antigenic.pm
• Bio/Tools/Run/PiseApplication/assp.pm
• Bio/Tools/Run/PiseApplication/backtranseq.pm
• Bio/Tools/Run/PiseApplication/bambe.pm
• Bio/Tools/Run/PiseApplication/banana.pm
• Bio/Tools/Run/PiseApplication/bionj.pm
• Bio/Tools/Run/PiseApplication/biosed.pm
• Bio/Tools/Run/PiseApplication/bl2seq.pm
• Bio/Tools/Run/PiseApplication/blast2.pm
• Bio/Tools/Run/PiseApplication/blimps.pm
• Bio/Tools/Run/PiseApplication/blimps_block.pm
• Bio/Tools/Run/PiseApplication/blimps_matrix.pm
• Bio/Tools/Run/PiseApplication/boxshade.pm
• Bio/Tools/Run/PiseApplication/btwisted.pm
• Bio/Tools/Run/PiseApplication/cai.pm
• Bio/Tools/Run/PiseApplication/cap.pm
• Bio/Tools/Run/PiseApplication/cds.pm
• Bio/Tools/Run/PiseApplication/chaos.pm
• Bio/Tools/Run/PiseApplication/charge.pm
• Bio/Tools/Run/PiseApplication/checktrans.pm
• Bio/Tools/Run/PiseApplication/chips.pm
• Bio/Tools/Run/PiseApplication/cirdna.pm
• Bio/Tools/Run/PiseApplication/clique.pm
• Bio/Tools/Run/PiseApplication/clustalw.pm
• Bio/Tools/Run/PiseApplication/clustalw_convert.pm
• Bio/Tools/Run/PiseApplication/codcmp.pm
• Bio/Tools/Run/PiseApplication/coderet.pm
• Bio/Tools/Run/PiseApplication/codnocod.pm
• Bio/Tools/Run/PiseApplication/codontree.pm
• Bio/Tools/Run/PiseApplication/codonw.pm
• Bio/Tools/Run/PiseApplication/comalign.pm
• Bio/Tools/Run/PiseApplication/combat.pm
• Bio/Tools/Run/PiseApplication/compseq.pm
• Bio/Tools/Run/PiseApplication/con_filter.pm
• Bio/Tools/Run/PiseApplication/confmat.pm
• Bio/Tools/Run/PiseApplication/cons.pm
• Bio/Tools/Run/PiseApplication/consense.pm
• Bio/Tools/Run/PiseApplication/consensus.pm
• Bio/Tools/Run/PiseApplication/cpgplot.pm
• Bio/Tools/Run/PiseApplication/cpgreport.pm
• Bio/Tools/Run/PiseApplication/cusp.pm
• Bio/Tools/Run/PiseApplication/cutseq.pm
• Bio/Tools/Run/PiseApplication/dan.pm
• Bio/Tools/Run/PiseApplication/dca.pm
• Bio/Tools/Run/PiseApplication/decorate.pm
• Bio/Tools/Run/PiseApplication/degapseq.pm
• Bio/Tools/Run/PiseApplication/descseq.pm
• Bio/Tools/Run/PiseApplication/dialign2.pm
• Bio/Tools/Run/PiseApplication/diffseq.pm
• Bio/Tools/Run/PiseApplication/digest.pm
• Bio/Tools/Run/PiseApplication/distmat.pm
• Bio/Tools/Run/PiseApplication/distquart.pm
• Bio/Tools/Run/PiseApplication/dnadist.pm
• Bio/Tools/Run/PiseApplication/dnapars.pm
• Bio/Tools/Run/PiseApplication/dollop.pm
• Bio/Tools/Run/PiseApplication/domainer.pm
• Bio/Tools/Run/PiseApplication/dotmatcher.pm
• Bio/Tools/Run/PiseApplication/dotpath.pm
• Bio/Tools/Run/PiseApplication/dottup.pm
• Bio/Tools/Run/PiseApplication/drawgram.pm
• Bio/Tools/Run/PiseApplication/drawpyr.pm
• Bio/Tools/Run/PiseApplication/drawtree.pm
• Bio/Tools/Run/PiseApplication/dreg.pm
• Bio/Tools/Run/PiseApplication/druid.pm
• Bio/Tools/Run/PiseApplication/dsc.pm
• Bio/Tools/Run/PiseApplication/dssp.pm
• Bio/Tools/Run/PiseApplication/einverted.pm
• Bio/Tools/Run/PiseApplication/emma.pm
• Bio/Tools/Run/PiseApplication/emowse.pm
• Bio/Tools/Run/PiseApplication/environ.pm
• Bio/Tools/Run/PiseApplication/eprimer3.pm
• Bio/Tools/Run/PiseApplication/equicktandem.pm
• Bio/Tools/Run/PiseApplication/est2genome.pm
• Bio/Tools/Run/PiseApplication/etandem.pm
• Bio/Tools/Run/PiseApplication/extractfeat.pm
• Bio/Tools/Run/PiseApplication/extractseq.pm
• Bio/Tools/Run/PiseApplication/fasta.pm
• Bio/Tools/Run/PiseApplication/fastdnaml.pm
• Bio/Tools/Run/PiseApplication/fastrna.pm
• Bio/Tools/Run/PiseApplication/filtersites.pm
• Bio/Tools/Run/PiseApplication/findkm.pm
• Bio/Tools/Run/PiseApplication/fitch.pm
• Bio/Tools/Run/PiseApplication/fmtseq.pm
• Bio/Tools/Run/PiseApplication/freak.pm
• Bio/Tools/Run/PiseApplication/fuzznuc.pm
• Bio/Tools/Run/PiseApplication/fuzzpro.pm
• Bio/Tools/Run/PiseApplication/fuzztran.pm
• Bio/Tools/Run/PiseApplication/gb2xml.pm
• Bio/Tools/Run/PiseApplication/geecee.pm
• Bio/Tools/Run/PiseApplication/genscan.pm
• Bio/Tools/Run/PiseApplication/getblock.pm
• Bio/Tools/Run/PiseApplication/getorf.pm
• Bio/Tools/Run/PiseApplication/gff2ps.pm
• Bio/Tools/Run/PiseApplication/gibbs.pm
• Bio/Tools/Run/PiseApplication/gibbs_scan.pm
• Bio/Tools/Run/PiseApplication/golden.pm
• Bio/Tools/Run/PiseApplication/grailclnt.pm
• Bio/Tools/Run/PiseApplication/gruppi.pm
• Bio/Tools/Run/PiseApplication/helixturnhelix.pm
• Bio/Tools/Run/PiseApplication/hmmalign.pm
• Bio/Tools/Run/PiseApplication/hmmbuild.pm
• Bio/Tools/Run/PiseApplication/hmmcalibrate.pm
• Bio/Tools/Run/PiseApplication/hmmconvert.pm
• Bio/Tools/Run/PiseApplication/hmmemit.pm
• Bio/Tools/Run/PiseApplication/hmmer2sam.pm
• Bio/Tools/Run/PiseApplication/hmmfetch.pm
• Bio/Tools/Run/PiseApplication/hmmpfam.pm
• Bio/Tools/Run/PiseApplication/hmmscore.pm
• Bio/Tools/Run/PiseApplication/hmmsearch.pm
• Bio/Tools/Run/PiseApplication/hmoment.pm
• Bio/Tools/Run/PiseApplication/homology.pm
• Bio/Tools/Run/PiseApplication/html4blast.pm
• Bio/Tools/Run/PiseApplication/iep.pm
• Bio/Tools/Run/PiseApplication/infoalign.pm
• Bio/Tools/Run/PiseApplication/infoseq.pm
• Bio/Tools/Run/PiseApplication/interface.pm
• Bio/Tools/Run/PiseApplication/isochore.pm
• Bio/Tools/Run/PiseApplication/kitsch.pm
• Bio/Tools/Run/PiseApplication/lassap.pm
• Bio/Tools/Run/PiseApplication/lindna.pm
• Bio/Tools/Run/PiseApplication/listor.pm
• Bio/Tools/Run/PiseApplication/loadseq.pm
• Bio/Tools/Run/PiseApplication/lvb.pm
• Bio/Tools/Run/PiseApplication/makehist.pm
• Bio/Tools/Run/PiseApplication/map.pm
• Bio/Tools/Run/PiseApplication/marscan.pm
• Bio/Tools/Run/PiseApplication/maskfeat.pm
• Bio/Tools/Run/PiseApplication/maskseq.pm
• Bio/Tools/Run/PiseApplication/matcher.pm
• Bio/Tools/Run/PiseApplication/megamerger.pm
• Bio/Tools/Run/PiseApplication/melting.pm
• Bio/Tools/Run/PiseApplication/merger.pm
• Bio/Tools/Run/PiseApplication/mfold.pm
• Bio/Tools/Run/PiseApplication/mix.pm
• Bio/Tools/Run/PiseApplication/modelfromalign.pm
• Bio/Tools/Run/PiseApplication/most.pm
• Bio/Tools/Run/PiseApplication/mreps.pm
• Bio/Tools/Run/PiseApplication/msa.pm
• Bio/Tools/Run/PiseApplication/msbar.pm
• Bio/Tools/Run/PiseApplication/mspcrunch.pm
• Bio/Tools/Run/PiseApplication/mview_alig.pm
• Bio/Tools/Run/PiseApplication/mview_blast.pm
• Bio/Tools/Run/PiseApplication/mwfilter.pm
• Bio/Tools/Run/PiseApplication/needle.pm
• Bio/Tools/Run/PiseApplication/neighbor.pm
• Bio/Tools/Run/PiseApplication/newcpgreport.pm
• Bio/Tools/Run/PiseApplication/newcpgseek.pm
• Bio/Tools/Run/PiseApplication/newseq.pm
• Bio/Tools/Run/PiseApplication/njdist.pm
• Bio/Tools/Run/PiseApplication/nnssp.pm
• Bio/Tools/Run/PiseApplication/notseq.pm
• Bio/Tools/Run/PiseApplication/nrscope.pm
• Bio/Tools/Run/PiseApplication/nthseq.pm
• Bio/Tools/Run/PiseApplication/octanol.pm
• Bio/Tools/Run/PiseApplication/oddcomp.pm
• Bio/Tools/Run/PiseApplication/palindrome.pm
• Bio/Tools/Run/PiseApplication/pam.pm
• Bio/Tools/Run/PiseApplication/parciquart.pm
• Bio/Tools/Run/PiseApplication/pars.pm
• Bio/Tools/Run/PiseApplication/pasteseq.pm
• Bio/Tools/Run/PiseApplication/patmatdb.pm
• Bio/Tools/Run/PiseApplication/patmatmotifs.pm
• Bio/Tools/Run/PiseApplication/patser.pm
• Bio/Tools/Run/PiseApplication/pdbsearch.pm
• Bio/Tools/Run/PiseApplication/pepcoil.pm
• Bio/Tools/Run/PiseApplication/pepinfo.pm
• Bio/Tools/Run/PiseApplication/pepnet.pm
• Bio/Tools/Run/PiseApplication/pepstats.pm
• Bio/Tools/Run/PiseApplication/pepwheel.pm
• Bio/Tools/Run/PiseApplication/pepwindow.pm
• Bio/Tools/Run/PiseApplication/pepwindowall.pm
• Bio/Tools/Run/PiseApplication/pestfind.pm
• Bio/Tools/Run/PiseApplication/pftools.pm
• Bio/Tools/Run/PiseApplication/phiblast.pm
• Bio/Tools/Run/PiseApplication/phyml.pm
• Bio/Tools/Run/PiseApplication/pima.pm
• Bio/Tools/Run/PiseApplication/plotcon.pm
• Bio/Tools/Run/PiseApplication/plotorf.pm
• Bio/Tools/Run/PiseApplication/plsearch.pm
• Bio/Tools/Run/PiseApplication/polydot.pm
• Bio/Tools/Run/PiseApplication/pratt.pm
• Bio/Tools/Run/PiseApplication/predator.pm
• Bio/Tools/Run/PiseApplication/preg.pm
• Bio/Tools/Run/PiseApplication/prettyalign.pm
• Bio/Tools/Run/PiseApplication/prettyplot.pm
• Bio/Tools/Run/PiseApplication/prettyseq.pm
• Bio/Tools/Run/PiseApplication/primersearch.pm
• Bio/Tools/Run/PiseApplication/primo.pm
• Bio/Tools/Run/PiseApplication/prodom.pm
• Bio/Tools/Run/PiseApplication/profit.pm
• Bio/Tools/Run/PiseApplication/prophecy.pm
• Bio/Tools/Run/PiseApplication/prophet.pm
• Bio/Tools/Run/PiseApplication/prose.pm
• Bio/Tools/Run/PiseApplication/prot_nucml.pm
• Bio/Tools/Run/PiseApplication/protal2dna.pm
• Bio/Tools/Run/PiseApplication/protdist.pm
• Bio/Tools/Run/PiseApplication/protpars.pm
• Bio/Tools/Run/PiseApplication/pscan.pm
• Bio/Tools/Run/PiseApplication/psiblast.pm
• Bio/Tools/Run/PiseApplication/psort2.pm
• Bio/Tools/Run/PiseApplication/pyramids.pm
• Bio/Tools/Run/PiseApplication/pyreval.pm
• Bio/Tools/Run/PiseApplication/qstar.pm
• Bio/Tools/Run/PiseApplication/quicktree.pm
• Bio/Tools/Run/PiseApplication/readnexus.pm
• Bio/Tools/Run/PiseApplication/readseq.pm
• Bio/Tools/Run/PiseApplication/recoder.pm
• Bio/Tools/Run/PiseApplication/redata.pm
• Bio/Tools/Run/PiseApplication/remap.pm
• Bio/Tools/Run/PiseApplication/repeats.pm
• Bio/Tools/Run/PiseApplication/restover.pm
• Bio/Tools/Run/PiseApplication/restrict.pm
• Bio/Tools/Run/PiseApplication/revseq.pm
• Bio/Tools/Run/PiseApplication/rnadistance.pm
• Bio/Tools/Run/PiseApplication/rnaeval.pm
• Bio/Tools/Run/PiseApplication/rnafold.pm
• Bio/Tools/Run/PiseApplication/rnaga.pm
• Bio/Tools/Run/PiseApplication/rnaheat.pm
• Bio/Tools/Run/PiseApplication/rnainverse.pm
• Bio/Tools/Run/PiseApplication/rnapdist.pm
• Bio/Tools/Run/PiseApplication/rnasubopt.pm
• Bio/Tools/Run/PiseApplication/sam2hmmer.pm
• Bio/Tools/Run/PiseApplication/sampleseqs.pm
• Bio/Tools/Run/PiseApplication/saps.pm
• Bio/Tools/Run/PiseApplication/satellites.pm
• Bio/Tools/Run/PiseApplication/scan_for_matches.pm
• Bio/Tools/Run/PiseApplication/scope.pm
• Bio/Tools/Run/PiseApplication/scopparse.pm
• Bio/Tools/Run/PiseApplication/seqboot.pm
• Bio/Tools/Run/PiseApplication/seqgen.pm
• Bio/Tools/Run/PiseApplication/seqmatchall.pm
• Bio/Tools/Run/PiseApplication/seqsblast.pm
• Bio/Tools/Run/PiseApplication/seqstat.pm
• Bio/Tools/Run/PiseApplication/showalign.pm
• Bio/Tools/Run/PiseApplication/showfeat.pm
• Bio/Tools/Run/PiseApplication/showorf.pm
• Bio/Tools/Run/PiseApplication/showseq.pm
• Bio/Tools/Run/PiseApplication/shuffleseq.pm
• Bio/Tools/Run/PiseApplication/sigcleave.pm
• Bio/Tools/Run/PiseApplication/siggen.pm
• Bio/Tools/Run/PiseApplication/sigscan.pm
• Bio/Tools/Run/PiseApplication/silent.pm
• Bio/Tools/Run/PiseApplication/sirna.pm
• Bio/Tools/Run/PiseApplication/splitter.pm
• Bio/Tools/Run/PiseApplication/sreformat.pm
• Bio/Tools/Run/PiseApplication/stretcher.pm
• Bio/Tools/Run/PiseApplication/stride.pm
• Bio/Tools/Run/PiseApplication/stssearch.pm
• Bio/Tools/Run/PiseApplication/supermatcher.pm
• Bio/Tools/Run/PiseApplication/syco.pm
• Bio/Tools/Run/PiseApplication/tacg.pm
• Bio/Tools/Run/PiseApplication/tfscan.pm
• Bio/Tools/Run/PiseApplication/tipdate.pm
• Bio/Tools/Run/PiseApplication/tmap.pm
• Bio/Tools/Run/PiseApplication/toppred.pm
• Bio/Tools/Run/PiseApplication/tranalign.pm
• Bio/Tools/Run/PiseApplication/transeq.pm
• Bio/Tools/Run/PiseApplication/treealign.pm
• Bio/Tools/Run/PiseApplication/trimest.pm
• Bio/Tools/Run/PiseApplication/trimseq.pm
• Bio/Tools/Run/PiseApplication/trnascan.pm
• Bio/Tools/Run/PiseApplication/twofeat.pm
• Bio/Tools/Run/PiseApplication/unroot.pm
• Bio/Tools/Run/PiseApplication/vectorstrip.pm
• Bio/Tools/Run/PiseApplication/water.pm
• Bio/Tools/Run/PiseApplication/weighbor.pm
• Bio/Tools/Run/PiseApplication/whichdb.pm
• Bio/Tools/Run/PiseApplication/wise2.pm
• Bio/Tools/Run/PiseApplication/wobble.pm
• Bio/Tools/Run/PiseApplication/wordcount.pm
• Bio/Tools/Run/PiseApplication/wordmatch.pm
• Bio/Tools/Run/PiseApplication/wublast2.pm
• Bio/Tools/Run/PiseApplication/xblast.pm
• Bio/Tools/Run/PiseApplication/xpound.pm
• Bio/Tools/Run/PiseJob.pm
• Bio/Tools/Run/PiseJobParser.pm
• Bio/Tools/Run/PiseWorkflow.pm
• Bio/Tools/Run/Primate.pm
• Bio/Tools/Run/Primer3.pm
• Bio/Tools/Run/Prints.pm
• Bio/Tools/Run/Profile.pm
• Bio/Tools/Run/Promoterwise.pm
• Bio/Tools/Run/Pseudowise.pm
• Bio/Tools/Run/RepeatMasker.pm
• Bio/Tools/Run/Seg.pm
• Bio/Tools/Run/Signalp.pm
• Bio/Tools/Run/Tmhmm.pm
• Bio/Tools/Run/TribeMCL.pm
• Bio/Tools/Run/Vista.pm
• Build.PL
• Changes
• INSTALL.PROGRAMS
• MANIFEST
• META.yml
• Makefile.PL
• ModuleBuildBioperl.pm
• README
• examples/pise/blast-kun.pl
• examples/pise/blast2.pl
• examples/pise/clustalw.pl
• examples/pise/dnadist.data
• examples/pise/dnadist.pl
• examples/pise/genscan.pl
• examples/pise/needle.pl
• examples/pise/phylo-kun.pl
• examples/pise/toppred.pl
• scripts/bioperl_application_installer.PLS
• scripts/multi_hmmsearch.PLS
• scripts/panalysis.PLS
• scripts/papplmaker.PLS
• scripts/run_neighbor.PLS
• scripts/run_protdist.PLS
• t/Amap.t
• t/AnalysisFactory_soap.t
• t/Analysis_soap.t
• t/Blat.t
• t/Clustalw.t
• t/Coil.t
• t/Consense.t
• t/DBA.t
• t/DrawGram.t
• t/DrawTree.t
• t/EMBOSS.t
• t/Eponine.t
• t/Exonerate.t
• t/FootPrinter.t
• t/Genewise.t
• t/Genscan.t
• t/Hmmer.t
• t/Kalign.t
• t/LVB.t
• t/Lagan.t
• t/MAFFT.t
• t/Mdust.t
• t/Molphy.t
• t/Muscle.t
• t/Neighbor.t
• t/PAML.t
• t/Phrap.t
• t/Pise.t
• t/Primate.t
• t/Primer3.t
• t/Prints.t
• t/Probalign.t
• t/Probcons.t
• t/Profile.t
• t/Promoterwise.t
• t/ProtDist.t
• t/ProtPars.t
• t/Pseudowise.t
• t/RepeatMasker.t
• t/Seg.t
• t/SeqBoot.t
• t/Signalp.t
• t/Sim4.t
• t/StandAloneFasta.t
• t/TCoffee.t
• t/Tmhmm.t
• t/TribeMCL.t
• t/Vista.t
• t/data/FootPrinter.seq.fa
• t/data/Genscan.FastA
• t/data/NM_002254.gb
• t/data/Phrap.fa
• t/data/Primer3.fa
• t/data/Prints_prot.FastA
• t/data/TribeMCL.bls
• t/data/TribeMCL.desc
• t/data/amino.fa
• t/data/blat_dna.fa
• t/data/cel-cbr-fam.aln
• t/data/codeml.mlc
• t/data/coil_protein_input
• t/data/consense.treefile
• t/data/cysprot.fa
• t/data/cysprot.msf
• t/data/cysprot1a.fa
• t/data/cysprot1a.msf
• t/data/cysprot1b.fa
• t/data/cysprot1b.msf
• t/data/dba1a.fa
• t/data/dba1b.fa
• t/data/dba2.fa
• t/data/dna1.fa
• t/data/dna2.fa
• t/data/ecolitst.fa
• t/data/eponine.fa
• t/data/exonerate_cdna.fa
• t/data/exonerate_cdna_rev.fa
• t/data/exonerate_genomic.fa
• t/data/exonerate_genomic_rev.fa
• t/data/fasta.fa
• t/data/fastalib.fa
• t/data/fastaprot.fa
• t/data/fontfile
• t/data/gf-s85.phylip
• t/data/hmmpfam_protein_input
• t/data/human.genomic
• t/data/lagan_dna.fa
• t/data/lvb.fa
• t/data/lvb_sequential.phy
• t/data/neighbor.dist
• t/data/new_dna.fa
• t/data/new_pep.fa
• t/data/pfam_sample_R11
• t/data/primate_query.fa
• t/data/primate_target.fa
• t/data/prints.dat
• t/data/profile_prot.FastA
• t/data/prosite.dat
• t/data/protpars.phy
• t/data/ps1.fa
• t/data/repeatmasker.fa
• t/data/road.pep
• t/data/signalp_input_protein
• t/data/sim4_cdna.fa
• t/data/sim4_database.fa
• t/data/sim4_genomic.fa
• t/data/test.txt
• t/data/test_prot.FastA
• t/data/tree_of_life
• t/data/treefile.example
• t/data/vista.cls
• t/data/vista.gff
• t/lib/Test/Builder.pm
• t/lib/Test/Builder/Module.pm
• t/lib/Test/Builder/Tester.pm
• t/lib/Test/More.pm
• t/lib/Test/Simple.pm
• t/lib/Test/Tutorial.pod