Files

• Build.PL
• CHANGES
• MANIFEST
• META.json
• META.yml
• README
• lib/Bio/ToolBox.pm
• lib/Bio/ToolBox/Data.pm
• lib/Bio/ToolBox/Data/Feature.pm
• lib/Bio/ToolBox/Data/Stream.pm
• lib/Bio/ToolBox/Data/common.pm
• lib/Bio/ToolBox/big_helper.pm
• lib/Bio/ToolBox/data_helper.pm
• lib/Bio/ToolBox/db_helper.pm
• lib/Bio/ToolBox/db_helper/bam.pm
• lib/Bio/ToolBox/db_helper/bigbed.pm
• lib/Bio/ToolBox/db_helper/bigwig.pm
• lib/Bio/ToolBox/db_helper/config.pm
• lib/Bio/ToolBox/db_helper/gff3_parser.pm
• lib/Bio/ToolBox/db_helper/useq.pm
• lib/Bio/ToolBox/db_helper/wiggle.pm
• lib/Bio/ToolBox/file_helper.pm
• lib/Bio/ToolBox/utility.pm
• scripts/CpG_calculator.pl
• scripts/average_gene.pl
• scripts/bam2wig.pl
• scripts/change_cluster_order.pl
• scripts/correlate_position_data.pl
• scripts/data2bed.pl
• scripts/data2fasta.pl
• scripts/data2frequency.pl
• scripts/data2gff.pl
• scripts/data2wig.pl
• scripts/db_setup.pl
• scripts/db_types.pl
• scripts/filter_bam.pl
• scripts/find_enriched_regions.pl
• scripts/get_binned_data.pl
• scripts/get_datasets.pl
• scripts/get_ensembl_annotation.pl
• scripts/get_feature_info.pl
• scripts/get_features.pl
• scripts/get_gene_regions.pl
• scripts/get_intersecting_features.pl
• scripts/get_relative_data.pl
• scripts/gff3_to_ucsc_table.pl
• scripts/graph_data.pl
• scripts/graph_histogram.pl
• scripts/graph_profile.pl
• scripts/join_data_file.pl
• scripts/manipulate_datasets.pl
• scripts/merge_datasets.pl
• scripts/pull_features.pl
• scripts/run_cluster.pl
• scripts/split_data_file.pl
• scripts/ucsc_table2gff3.pl
• scripts/wig2data.pl
• t/01.Data.t
• t/02.DB.t
• t/03.Bam.t
• t/04.BigBed.t
• t/05.BigWig.t
• t/06.BigWigSet.t
• t/07.USeq.t
• t/08.Wiggle.t
• t/Data/biotoolbox.cfg
• t/Data/chrI.gff3
• t/Data/sample.bed
• t/Data/sample1.bam
• t/Data/sample1.bam.bai
• t/Data/sample1.bb
• t/Data/sample2.bw
• t/Data/sample2.gff3
• t/Data/sample2.wib
• t/Data/sample3.useq
• t/Data/sample3/metadata.txt
• t/Data/sample3/sample3_f.bw
• t/Data/sample3/sample3_r.bw