Bio-Grid-Run-SGE 0.066 Latest
Kwalitee Issues
- use_strict
-
Add 'use strict' (or its equivalents) to all modules, or convince us that your favorite module is well-known enough and people can easily see the modules are strictly written.
Error: FindBinNew
- prereq_matches_use
-
List all used modules in META.yml requires
Error:
- Params::Validate
- has_meta_json
-
Add a META.json to the distribution. Your buildtool should be able to autogenerate it.
- proper_libs
-
Move your *.pm files in a directory named 'lib'. The directory structure should look like 'lib/Your/Module.pm' for a module named 'Your::Module'. If you need to provide additional files, e.g. for testing, that should not be considered for Kwalitee, then you should look at the 'provides' map in META.yml to limit the files scanned; or use the 'no_index' map to exclude parts of the distribution.
Error: misc/Mtest.pm
- use_warnings
-
Add 'use warnings' (or its equivalents) to all modules, or convince us that your favorite module is well-known enough and people can easily see the modules warn when something bad happens.
Error: FindBinNew
- test_prereq_matches_use
-
List all modules used in the test suite in META.yml test_requires
Error:
- Math::Combinatorics
- consistent_version
-
Split the distribution, or fix the version numbers to make them consistent (use the highest version number to avoid version downgrade).
Error: 0.0101,0.066,1.51
- meta_yml_has_provides
-
Add all modules contained in this distribution to the META.yml field 'provides'. Module::Build or Dist::Zilla::Plugin::MetaProvides do this automatically for you.
- meta_yml_has_repository_resource
-
Add a 'repository' resource to the META.yml via 'meta_add' accessor (for Module::Build) or META_ADD parameter (for ExtUtils::MakeMaker).
Modules
Name | Abstract | Version | View |
---|---|---|---|
Bio::Grid::Run::SGE | Distribute (biological) analyses on the local SGE grid | 0.066 | metacpan |
Bio::Grid::Run::SGE::Index | Provides an interface to load index classes. | 0.066 | metacpan |
Bio::Grid::Run::SGE::Index::Dummy | dummy index for testing purposes | 0.066 | metacpan |
Bio::Grid::Run::SGE::Index::FileList | Creates an index from a list of files | 0.066 | metacpan |
Bio::Grid::Run::SGE::Index::FileRecordsFromNDJSON | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Index::General | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Index::GroupedTable | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Index::List | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Index::ListFromFile | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Index::NDJSON | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Index::Range | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Index::RunOnce | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Iterator | Provides an interface to load iterator classes. | 0.066 | metacpan |
Bio::Grid::Run::SGE::Iterator::AllvsAll | Runs all elements of one index against each other | 0.066 | metacpan |
Bio::Grid::Run::SGE::Iterator::AllvsAllNoRep | Runs all elements of one index against each other, without repetitions | 0.066 | metacpan |
Bio::Grid::Run::SGE::Iterator::AvsB | iterate over two different indices | 0.066 | metacpan |
Bio::Grid::Run::SGE::Iterator::Consecutive | iterate consecutively through an index | 0.066 | metacpan |
Bio::Grid::Run::SGE::Iterator::Dummy | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Iterator::List | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Iterator::None | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Job | the container for settings and important functions | 0.0101 | metacpan |
Bio::Grid::Run::SGE::Log::Analysis | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Log::Notify::Jabber | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Log::Notify::Mail | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Log::Worker | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Master | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Role::Indexable | Basic role for all indices | 0.066 | metacpan |
Bio::Grid::Run::SGE::Role::Iterable | iterator role/base class | 0.066 | metacpan |
Bio::Grid::Run::SGE::Util | Utility functions for Bio::Grid::Run::SGE | 0.066 | metacpan |
Bio::Grid::Run::SGE::Util::Blast | basic blast utitlity functions for cluster-wide operations | 0.066 | metacpan |
Bio::Grid::Run::SGE::Util::ExampleEnvironment | 0.066 | metacpan | |
Bio::Grid::Run::SGE::Worker | Run the cluster script | 0.066 | metacpan |
FindBinNew | 1.51 | metacpan | |
Mtest | 0.0101 | metacpan |