Microarray 0.33
- Released by
- CJONES
- Version
- Release Date
- 2008-01-30
- Kwalitee
- 134.38
- Core Kwalitee
- 87.5
- LINKS
Microarray 0.33 Deleted
Kwalitee Issues
- has_meta_yml
-
Add a META.yml to the distribution. Your buildtool should be able to autogenerate it.
- buildtool_not_executable
-
Change the permissions of Build.PL/Makefile.PL to not-executable.
- prereq_matches_use
-
List all used modules in META.yml requires
Error:
- File::Slurp
- GD
- GD::Image
- Image::ExifTool
- Statistics::Descriptive
- no_pod_errors
-
Remove the POD errors. You can check for POD errors automatically by including Test::Pod to your test suite.
Error: Microarray-0.33/lib/Microarray/Analysis/CGH.pm -- Around line 484: You can't have =items (as at line 490) unless the first thing after the =over is an =item
- has_meta_json
-
Add a META.json to the distribution. Your buildtool should be able to autogenerate it.
- meta_yml_has_license
-
Define the license if you are using in Build.PL. If you are using MakeMaker (Makefile.PL) you should upgrade to ExtUtils::MakeMaker version 6.31.
- test_prereq_matches_use
-
List all modules used in the test suite in META.yml test_requires
Error:
- Test::Deep
- Test::Differences
- Test::Group
- consistent_version
-
Split the distribution, or fix the version numbers to make them consistent (use the highest version number to avoid version downgrade).
Error: 0.33,1.12,1.13,1.15,1.17,1.2,1.22,1.23,1.3,1.6,1.7,1.9,2.15,2.17
- has_separate_license_file
-
This is not a critical issue. Currently mainly informative for the CPANTS authors. It might be removed later.
Modules
| Name | Abstract | Version | View |
|---|---|---|---|
| Microarray | A Perl module for creating and manipulating microarray objects | 0.33 | metacpan |
| Microarray::Analysis | A Perl module for analysing microarray data | 1.2 | metacpan |
| Microarray::Analysis::CGH | A Perl module for analysing CGH microarray data | 1.2 | metacpan |
| Microarray::Feature | A Perl module for creating and manipulating microarray feature objects | 1.13 | metacpan |
| Microarray::File | Perl objects for handling microarray file formats | 1.23 | metacpan |
| Microarray::File::Clone_Locns | An object oriented Perl module describing a genomic clone location file | 1.6 | metacpan |
| Microarray::File::Data | An object oriented Perl module describing microarray data files | 2.17 | metacpan |
| Microarray::File::Data::Agilent | A Perl module for managing Agilent microarray files | 1.9 | metacpan |
| Microarray::File::Data::BlueFuse | A Perl module for managing BlueFuse 'output' files | 1.17 | metacpan |
| Microarray::File::Data::GenePix | A Perl module for managing microarray Axon GenePix data files | 1.15 | metacpan |
| Microarray::File::Data::Manor_Output | A Perl module for managing 'Manor' clone and spot level output | 1.7 | metacpan |
| Microarray::File::Data::Quantarray | A Perl module for managing Perkin Elmer 'Scanarray' microarray files | 2.17 | metacpan |
| Microarray::File::GAL | A Perl module for managing microarray GAL file objects | 2.15 | metacpan |
| Microarray::File::Image | Perl objects for handling microarray image file formats | 1.3 | metacpan |
| Microarray::Image | A Perl module for creating microarray data plots | 1.22 | metacpan |
| Microarray::Spot | A Perl module for creating and manipulating microarray spot objects | 1.12 | metacpan |
Provides
| Name | File | View |
|---|---|---|
| agilent_file | lib/Microarray/File/Data/Agilent.pm | metacpan |
| analysis | lib/Microarray/Analysis.pm | metacpan |
| array_feature | lib/Microarray/Feature.pm | metacpan |
| array_spot | lib/Microarray/Spot.pm | metacpan |
| bluefuse_file | lib/Microarray/File/Data/BlueFuse.pm | metacpan |
| cgh_analysis | lib/Microarray/Analysis/CGH.pm | metacpan |
| cgh_plot | lib/Microarray/Image.pm | metacpan |
| chromosome_cgh | lib/Microarray/Analysis/CGH.pm | metacpan |
| clone_locn_file | lib/Microarray/File/Clone_Locns.pm | metacpan |
| data_file | lib/Microarray/File/Data.pm | metacpan |
| delimited_file | lib/Microarray/File.pm | metacpan |
| gal_file | lib/Microarray/File/GAL.pm | metacpan |
| genepix_file | lib/Microarray/File/Data/GenePix.pm | metacpan |
| genepix_image | lib/Microarray/File/Data/GenePix.pm | metacpan |
| genome_cgh | lib/Microarray/Analysis/CGH.pm | metacpan |
| genome_cgh_plot | lib/Microarray/Image.pm | metacpan |
| heatmap | lib/Microarray/Image.pm | metacpan |
| intensity_heatmap | lib/Microarray/Image.pm | metacpan |
| intensity_scatter | lib/Microarray/Image.pm | metacpan |
| log2_heatmap | lib/Microarray/Image.pm | metacpan |
| log_file | lib/Microarray/File.pm | metacpan |
| ma_plot | lib/Microarray/Image.pm | metacpan |
| manor_clone_level | lib/Microarray/File/Data/Manor_Output.pm | metacpan |
| microarray | lib/Microarray.pm | metacpan |
| microarray_file | lib/Microarray/File.pm | metacpan |
| microarray_image_file | lib/Microarray/File/Image.pm | metacpan |
| microarray_text_file | lib/Microarray/File.pm | metacpan |
| plot | lib/Microarray/Image.pm | metacpan |
| quantarray_file | lib/Microarray/File/Data/Quantarray.pm | metacpan |
| quantarray_image | lib/Microarray/File/Data/Quantarray.pm | metacpan |
| ri_plot | lib/Microarray/Image.pm | metacpan |
| simple_delimited_file | lib/Microarray/File.pm | metacpan |