Errors

no_pod_errors

Bio-MAGE-20030502.3/MAGE/Array/Array.pm -- Around line 484: '=item' outside of any '=over' Around line 569: You forgot a '=back' before '=head2' Around line 1029: Expected '=item 2' Around line 1034: Expected '=item 3' Around line 1039: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/ArrayGroup.pm -- Around line 526: '=item' outside of any '=over' Around line 611: You forgot a '=back' before '=head2' Around line 1363: Expected '=item 2' Around line 1368: Expected '=item 3' Around line 1373: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/ArrayManufacture.pm -- Around line 499: '=item' outside of any '=over' Around line 584: You forgot a '=back' before '=head2' Around line 900: Expected '=item 2' Around line 905: Expected '=item 3' Around line 910: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/ArrayManufactureDeviation.pm -- Around line 323: '=item' outside of any '=over' Around line 408: You forgot a '=back' before '=head2' Around line 436: Expected '=item 2' Around line 441: Expected '=item 3' Around line 446: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/FeatureDefect.pm -- Around line 356: '=item' outside of any '=over' Around line 441: You forgot a '=back' before '=head2' Around line 469: Expected '=item 2' Around line 474: Expected '=item 3' Around line 479: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/Fiducial.pm -- Around line 395: '=item' outside of any '=over' Around line 480: You forgot a '=back' before '=head2' Around line 508: Expected '=item 2' Around line 513: Expected '=item 3' Around line 518: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/ManufactureLIMS.pm -- Around line 415: '=item' outside of any '=over' Around line 500: You forgot a '=back' before '=head2' Around line 600: Expected '=item 2' Around line 605: Expected '=item 3' Around line 610: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/ManufactureLIMSBiomaterial.pm -- Around line 371: '=item' outside of any '=over' Around line 456: You forgot a '=back' before '=head2' Around line 772: Expected '=item 2' Around line 777: Expected '=item 3' Around line 782: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/PositionDelta.pm -- Around line 308: '=item' outside of any '=over' Around line 393: You forgot a '=back' before '=head2' Around line 565: Expected '=item 2' Around line 570: Expected '=item 3' Around line 575: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Array/ZoneDefect.pm -- Around line 356: '=item' outside of any '=over' Around line 441: You forgot a '=back' before '=head2' Around line 469: Expected '=item 2' Around line 474: Expected '=item 3' Around line 479: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/ArrayDesign.pm -- Around line 510: '=item' outside of any '=over' Around line 595: You forgot a '=back' before '=head2' Around line 911: Expected '=item 2' Around line 916: Expected '=item 3' Around line 921: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/CompositeGroup.pm -- Around line 375: '=item' outside of any '=over' Around line 460: You forgot a '=back' before '=head2' Around line 632: Expected '=item 2' Around line 637: Expected '=item 3' Around line 642: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/DesignElementGroup.pm -- Around line 398: '=item' outside of any '=over' Around line 483: You forgot a '=back' before '=head2' Around line 655: Expected '=item 2' Around line 660: Expected '=item 3' Around line 665: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/FeatureGroup.pm -- Around line 501: '=item' outside of any '=over' Around line 586: You forgot a '=back' before '=head2' Around line 974: Expected '=item 2' Around line 979: Expected '=item 3' Around line 984: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/PhysicalArrayDesign.pm -- Around line 467: '=item' outside of any '=over' Around line 552: You forgot a '=back' before '=head2' Around line 868: Expected '=item 2' Around line 873: Expected '=item 3' Around line 878: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/ReporterGroup.pm -- Around line 376: '=item' outside of any '=over' Around line 461: You forgot a '=back' before '=head2' Around line 633: Expected '=item 2' Around line 638: Expected '=item 3' Around line 643: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/Zone.pm -- Around line 403: '=item' outside of any '=over' Around line 488: You forgot a '=back' before '=head2' Around line 1092: Expected '=item 2' Around line 1097: Expected '=item 3' Around line 1102: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/ZoneGroup.pm -- Around line 392: '=item' outside of any '=over' Around line 477: You forgot a '=back' before '=head2' Around line 793: Expected '=item 2' Around line 798: Expected '=item 3' Around line 803: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/ArrayDesign/ZoneLayout.pm -- Around line 326: '=item' outside of any '=over' Around line 411: You forgot a '=back' before '=head2' Around line 727: Expected '=item 2' Around line 732: Expected '=item 3' Around line 737: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/AuditAndSecurity/Audit.pm -- Around line 349: '=item' outside of any '=over' Around line 434: You forgot a '=back' before '=head2' Around line 610: Expected '=item 2' Around line 615: Expected '=item 3' Around line 620: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/AuditAndSecurity/Contact.pm -- Around line 411: '=item' outside of any '=over' Around line 496: You forgot a '=back' before '=head2' Around line 1100: Expected '=item 2' Around line 1105: Expected '=item 3' Around line 1110: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/AuditAndSecurity/Organization.pm -- Around line 422: '=item' outside of any '=over' Around line 507: You forgot a '=back' before '=head2' Around line 1111: Expected '=item 2' Around line 1116: Expected '=item 3' Around line 1121: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/AuditAndSecurity/Person.pm -- Around line 449: '=item' outside of any '=over' Around line 534: You forgot a '=back' before '=head2' Around line 1354: Expected '=item 2' Around line 1359: Expected '=item 3' Around line 1364: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/AuditAndSecurity/Security.pm -- Around line 382: '=item' outside of any '=over' Around line 467: You forgot a '=back' before '=head2' Around line 639: Expected '=item 2' Around line 644: Expected '=item 3' Around line 649: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/AuditAndSecurity/SecurityGroup.pm -- Around line 349: '=item' outside of any '=over' Around line 434: You forgot a '=back' before '=head2' Around line 606: Expected '=item 2' Around line 611: Expected '=item 3' Around line 616: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BQS/BibliographicReference.pm -- Around line 453: '=item' outside of any '=over' Around line 538: You forgot a '=back' before '=head2' Around line 1286: Expected '=item 2' Around line 1291: Expected '=item 3' Around line 1296: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/BioAssay.pm -- Around line 399: '=item' outside of any '=over' Around line 484: You forgot a '=back' before '=head2' Around line 656: Expected '=item 2' Around line 661: Expected '=item 3' Around line 666: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/BioAssayCreation.pm -- Around line 439: '=item' outside of any '=over' Around line 524: You forgot a '=back' before '=head2' Around line 696: Expected '=item 2' Around line 701: Expected '=item 3' Around line 706: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/BioAssayTreatment.pm -- Around line 406: '=item' outside of any '=over' Around line 491: You forgot a '=back' before '=head2' Around line 663: Expected '=item 2' Around line 668: Expected '=item 3' Around line 673: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/Channel.pm -- Around line 349: '=item' outside of any '=over' Around line 434: You forgot a '=back' before '=head2' Around line 606: Expected '=item 2' Around line 611: Expected '=item 3' Around line 616: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/DerivedBioAssay.pm -- Around line 441: '=item' outside of any '=over' Around line 526: You forgot a '=back' before '=head2' Around line 698: Expected '=item 2' Around line 703: Expected '=item 3' Around line 708: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/FeatureExtraction.pm -- Around line 395: '=item' outside of any '=over' Around line 480: You forgot a '=back' before '=head2' Around line 652: Expected '=item 2' Around line 657: Expected '=item 3' Around line 662: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/Hybridization.pm -- Around line 367: '=item' outside of any '=over' Around line 452: You forgot a '=back' before '=head2' Around line 624: Expected '=item 2' Around line 629: Expected '=item 3' Around line 634: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/Image.pm -- Around line 392: '=item' outside of any '=over' Around line 477: You forgot a '=back' before '=head2' Around line 721: Expected '=item 2' Around line 726: Expected '=item 3' Around line 731: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/ImageAcquisition.pm -- Around line 388: '=item' outside of any '=over' Around line 473: You forgot a '=back' before '=head2' Around line 645: Expected '=item 2' Around line 650: Expected '=item 3' Around line 655: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/MeasuredBioAssay.pm -- Around line 408: '=item' outside of any '=over' Around line 493: You forgot a '=back' before '=head2' Around line 665: Expected '=item 2' Around line 670: Expected '=item 3' Around line 675: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssay/PhysicalBioAssay.pm -- Around line 441: '=item' outside of any '=over' Around line 526: You forgot a '=back' before '=head2' Around line 698: Expected '=item 2' Around line 703: Expected '=item 3' Around line 708: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioAssayData.pm -- Around line 491: '=item' outside of any '=over' Around line 576: You forgot a '=back' before '=head2' Around line 748: Expected '=item 2' Around line 753: Expected '=item 3' Around line 758: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioAssayDatum.pm -- Around line 365: '=item' outside of any '=over' Around line 450: You forgot a '=back' before '=head2' Around line 550: Expected '=item 2' Around line 555: Expected '=item 3' Around line 560: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioAssayDimension.pm -- Around line 349: '=item' outside of any '=over' Around line 434: You forgot a '=back' before '=head2' Around line 606: Expected '=item 2' Around line 611: Expected '=item 3' Around line 616: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioAssayMap.pm -- Around line 395: '=item' outside of any '=over' Around line 480: You forgot a '=back' before '=head2' Around line 652: Expected '=item 2' Around line 657: Expected '=item 3' Around line 662: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioAssayMapping.pm -- Around line 290: '=item' outside of any '=over' Around line 375: You forgot a '=back' before '=head2' Around line 403: Expected '=item 2' Around line 408: Expected '=item 3' Around line 413: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioDataCube.pm -- Around line 280: '=item' outside of any '=over' Around line 365: You forgot a '=back' before '=head2' Around line 541: Expected '=item 2' Around line 546: Expected '=item 3' Around line 551: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioDataTuples.pm -- Around line 290: '=item' outside of any '=over' Around line 375: You forgot a '=back' before '=head2' Around line 403: Expected '=item 2' Around line 408: Expected '=item 3' Around line 413: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/BioDataValues.pm -- Around line 276: '=item' outside of any '=over' Around line 361: You forgot a '=back' before '=head2' Around line 389: Expected '=item 2' Around line 394: Expected '=item 3' Around line 399: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/CompositeSequenceDimension.pm -- Around line 349: '=item' outside of any '=over' Around line 434: You forgot a '=back' before '=head2' Around line 606: Expected '=item 2' Around line 611: Expected '=item 3' Around line 616: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/DerivedBioAssayData.pm -- Around line 414: '=item' outside of any '=over' Around line 499: You forgot a '=back' before '=head2' Around line 671: Expected '=item 2' Around line 676: Expected '=item 3' Around line 681: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/DesignElementDimension.pm -- Around line 333: '=item' outside of any '=over' Around line 418: You forgot a '=back' before '=head2' Around line 590: Expected '=item 2' Around line 595: Expected '=item 3' Around line 600: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/DesignElementMap.pm -- Around line 345: '=item' outside of any '=over' Around line 430: You forgot a '=back' before '=head2' Around line 602: Expected '=item 2' Around line 607: Expected '=item 3' Around line 612: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/DesignElementMapping.pm -- Around line 290: '=item' outside of any '=over' Around line 375: You forgot a '=back' before '=head2' Around line 403: Expected '=item 2' Around line 408: Expected '=item 3' Around line 413: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/FeatureDimension.pm -- Around line 349: '=item' outside of any '=over' Around line 434: You forgot a '=back' before '=head2' Around line 606: Expected '=item 2' Around line 611: Expected '=item 3' Around line 616: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/MeasuredBioAssayData.pm -- Around line 380: '=item' outside of any '=over' Around line 465: You forgot a '=back' before '=head2' Around line 637: Expected '=item 2' Around line 642: Expected '=item 3' Around line 647: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/QuantitationTypeDimension.pm -- Around line 349: '=item' outside of any '=over' Around line 434: You forgot a '=back' before '=head2' Around line 606: Expected '=item 2' Around line 611: Expected '=item 3' Around line 616: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/QuantitationTypeMap.pm -- Around line 395: '=item' outside of any '=over' Around line 480: You forgot a '=back' before '=head2' Around line 652: Expected '=item 2' Around line 657: Expected '=item 3' Around line 662: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/QuantitationTypeMapping.pm -- Around line 290: '=item' outside of any '=over' Around line 375: You forgot a '=back' before '=head2' Around line 403: Expected '=item 2' Around line 408: Expected '=item 3' Around line 413: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/ReporterDimension.pm -- Around line 349: '=item' outside of any '=over' Around line 434: You forgot a '=back' before '=head2' Around line 606: Expected '=item 2' Around line 611: Expected '=item 3' Around line 616: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioAssayData/Transformation.pm -- Around line 494: '=item' outside of any '=over' Around line 579: You forgot a '=back' before '=head2' Around line 751: Expected '=item 2' Around line 756: Expected '=item 3' Around line 761: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioEvent/BioEvent.pm -- Around line 375: '=item' outside of any '=over' Around line 460: You forgot a '=back' before '=head2' Around line 632: Expected '=item 2' Around line 637: Expected '=item 3' Around line 642: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioEvent/Map.pm -- Around line 345: '=item' outside of any '=over' Around line 430: You forgot a '=back' before '=head2' Around line 602: Expected '=item 2' Around line 607: Expected '=item 3' Around line 612: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/BioMaterial.pm -- Around line 462: '=item' outside of any '=over' Around line 547: You forgot a '=back' before '=head2' Around line 719: Expected '=item 2' Around line 724: Expected '=item 3' Around line 729: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/BioMaterialMeasurement.pm -- Around line 323: '=item' outside of any '=over' Around line 408: You forgot a '=back' before '=head2' Around line 436: Expected '=item 2' Around line 441: Expected '=item 3' Around line 446: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/BioSample.pm -- Around line 401: '=item' outside of any '=over' Around line 486: You forgot a '=back' before '=head2' Around line 658: Expected '=item 2' Around line 663: Expected '=item 3' Around line 668: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/BioSource.pm -- Around line 401: '=item' outside of any '=over' Around line 486: You forgot a '=back' before '=head2' Around line 658: Expected '=item 2' Around line 663: Expected '=item 3' Around line 668: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/Compound.pm -- Around line 424: '=item' outside of any '=over' Around line 509: You forgot a '=back' before '=head2' Around line 753: Expected '=item 2' Around line 758: Expected '=item 3' Around line 763: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/CompoundMeasurement.pm -- Around line 323: '=item' outside of any '=over' Around line 408: You forgot a '=back' before '=head2' Around line 436: Expected '=item 2' Around line 441: Expected '=item 3' Around line 446: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/LabeledExtract.pm -- Around line 401: '=item' outside of any '=over' Around line 486: You forgot a '=back' before '=head2' Around line 658: Expected '=item 2' Around line 663: Expected '=item 3' Around line 668: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioMaterial/Treatment.pm -- Around line 470: '=item' outside of any '=over' Around line 555: You forgot a '=back' before '=head2' Around line 799: Expected '=item 2' Around line 804: Expected '=item 3' Around line 809: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioSequence/BioSequence.pm -- Around line 550: '=item' outside of any '=over' Around line 635: You forgot a '=back' before '=head2' Around line 1097: Expected '=item 2' Around line 1102: Expected '=item 3' Around line 1107: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioSequence/SeqFeature.pm -- Around line 343: '=item' outside of any '=over' Around line 428: You forgot a '=back' before '=head2' Around line 532: Expected '=item 2' Around line 537: Expected '=item 3' Around line 542: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioSequence/SeqFeatureLocation.pm -- Around line 332: '=item' outside of any '=over' Around line 417: You forgot a '=back' before '=head2' Around line 517: Expected '=item 2' Around line 522: Expected '=item 3' Around line 527: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/BioSequence/SequencePosition.pm -- Around line 288: '=item' outside of any '=over' Around line 373: You forgot a '=back' before '=head2' Around line 545: Expected '=item 2' Around line 550: Expected '=item 3' Around line 555: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Describable.pm -- Around line 400: '=item' outside of any '=over' Around line 485: You forgot a '=back' before '=head2' Around line 513: Expected '=item 2' Around line 518: Expected '=item 3' Around line 523: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Description/Database.pm -- Around line 367: '=item' outside of any '=over' Around line 452: You forgot a '=back' before '=head2' Around line 768: Expected '=item 2' Around line 773: Expected '=item 3' Around line 778: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Description/DatabaseEntry.pm -- Around line 350: '=item' outside of any '=over' Around line 435: You forgot a '=back' before '=head2' Around line 679: Expected '=item 2' Around line 684: Expected '=item 3' Around line 689: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Description/Description.pm -- Around line 446: '=item' outside of any '=over' Around line 531: You forgot a '=back' before '=head2' Around line 703: Expected '=item 2' Around line 708: Expected '=item 3' Around line 713: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Description/ExternalReference.pm -- Around line 292: '=item' outside of any '=over' Around line 377: You forgot a '=back' before '=head2' Around line 693: Expected '=item 2' Around line 698: Expected '=item 3' Around line 703: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Description/OntologyEntry.pm -- Around line 354: '=item' outside of any '=over' Around line 439: You forgot a '=back' before '=head2' Around line 683: Expected '=item 2' Around line 688: Expected '=item 3' Around line 693: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/CompositeCompositeMap.pm -- Around line 395: '=item' outside of any '=over' Around line 480: You forgot a '=back' before '=head2' Around line 652: Expected '=item 2' Around line 657: Expected '=item 3' Around line 662: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/CompositePosition.pm -- Around line 343: '=item' outside of any '=over' Around line 428: You forgot a '=back' before '=head2' Around line 600: Expected '=item 2' Around line 605: Expected '=item 3' Around line 610: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/CompositeSequence.pm -- Around line 429: '=item' outside of any '=over' Around line 514: You forgot a '=back' before '=head2' Around line 686: Expected '=item 2' Around line 691: Expected '=item 3' Around line 696: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/DesignElement.pm -- Around line 366: '=item' outside of any '=over' Around line 451: You forgot a '=back' before '=head2' Around line 623: Expected '=item 2' Around line 628: Expected '=item 3' Around line 633: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/Feature.pm -- Around line 528: '=item' outside of any '=over' Around line 613: You forgot a '=back' before '=head2' Around line 785: Expected '=item 2' Around line 790: Expected '=item 3' Around line 795: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/FeatureInformation.pm -- Around line 323: '=item' outside of any '=over' Around line 408: You forgot a '=back' before '=head2' Around line 436: Expected '=item 2' Around line 441: Expected '=item 3' Around line 446: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/FeatureLocation.pm -- Around line 274: '=item' outside of any '=over' Around line 359: You forgot a '=back' before '=head2' Around line 531: Expected '=item 2' Around line 536: Expected '=item 3' Around line 541: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/FeatureReporterMap.pm -- Around line 395: '=item' outside of any '=over' Around line 480: You forgot a '=back' before '=head2' Around line 652: Expected '=item 2' Around line 657: Expected '=item 3' Around line 662: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/MismatchInformation.pm -- Around line 283: '=item' outside of any '=over' Around line 368: You forgot a '=back' before '=head2' Around line 612: Expected '=item 2' Around line 617: Expected '=item 3' Around line 622: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/Position.pm -- Around line 308: '=item' outside of any '=over' Around line 393: You forgot a '=back' before '=head2' Around line 565: Expected '=item 2' Around line 570: Expected '=item 3' Around line 575: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/Reporter.pm -- Around line 463: '=item' outside of any '=over' Around line 548: You forgot a '=back' before '=head2' Around line 720: Expected '=item 2' Around line 725: Expected '=item 3' Around line 730: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/ReporterCompositeMap.pm -- Around line 395: '=item' outside of any '=over' Around line 480: You forgot a '=back' before '=head2' Around line 652: Expected '=item 2' Around line 657: Expected '=item 3' Around line 662: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/DesignElement/ReporterPosition.pm -- Around line 343: '=item' outside of any '=over' Around line 428: You forgot a '=back' before '=head2' Around line 600: Expected '=item 2' Around line 605: Expected '=item 3' Around line 610: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Experiment/Experiment.pm -- Around line 481: '=item' outside of any '=over' Around line 566: You forgot a '=back' before '=head2' Around line 738: Expected '=item 2' Around line 743: Expected '=item 3' Around line 748: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Experiment/ExperimentDesign.pm -- Around line 494: '=item' outside of any '=over' Around line 579: You forgot a '=back' before '=head2' Around line 607: Expected '=item 2' Around line 612: Expected '=item 3' Around line 617: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Experiment/ExperimentalFactor.pm -- Around line 415: '=item' outside of any '=over' Around line 500: You forgot a '=back' before '=head2' Around line 672: Expected '=item 2' Around line 677: Expected '=item 3' Around line 682: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Experiment/FactorValue.pm -- Around line 415: '=item' outside of any '=over' Around line 500: You forgot a '=back' before '=head2' Around line 672: Expected '=item 2' Around line 677: Expected '=item 3' Around line 682: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Extendable.pm -- Around line 361: '=item' outside of any '=over' Around line 446: You forgot a '=back' before '=head2' Around line 474: Expected '=item 2' Around line 479: Expected '=item 3' Around line 484: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/HigherLevelAnalysis/BioAssayDataCluster.pm -- Around line 382: '=item' outside of any '=over' Around line 467: You forgot a '=back' before '=head2' Around line 639: Expected '=item 2' Around line 644: Expected '=item 3' Around line 649: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/HigherLevelAnalysis/Node.pm -- Around line 395: '=item' outside of any '=over' Around line 480: You forgot a '=back' before '=head2' Around line 508: Expected '=item 2' Around line 513: Expected '=item 3' Around line 518: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/HigherLevelAnalysis/NodeContents.pm -- Around line 395: '=item' outside of any '=over' Around line 480: You forgot a '=back' before '=head2' Around line 508: Expected '=item 2' Around line 513: Expected '=item 3' Around line 518: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/HigherLevelAnalysis/NodeValue.pm -- Around line 374: '=item' outside of any '=over' Around line 459: You forgot a '=back' before '=head2' Around line 631: Expected '=item 2' Around line 636: Expected '=item 3' Around line 641: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Identifiable.pm -- Around line 409: '=item' outside of any '=over' Around line 494: You forgot a '=back' before '=head2' Around line 666: Expected '=item 2' Around line 671: Expected '=item 3' Around line 676: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/ConcentrationUnit.pm -- Around line 288: '=item' outside of any '=over' Around line 373: You forgot a '=back' before '=head2' Around line 549: Expected '=item 2' Around line 554: Expected '=item 3' Around line 559: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/DistanceUnit.pm -- Around line 283: '=item' outside of any '=over' Around line 368: You forgot a '=back' before '=head2' Around line 544: Expected '=item 2' Around line 549: Expected '=item 3' Around line 554: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/MassUnit.pm -- Around line 283: '=item' outside of any '=over' Around line 368: You forgot a '=back' before '=head2' Around line 544: Expected '=item 2' Around line 549: Expected '=item 3' Around line 554: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/Measurement.pm -- Around line 336: '=item' outside of any '=over' Around line 421: You forgot a '=back' before '=head2' Around line 745: Expected '=item 2' Around line 750: Expected '=item 3' Around line 755: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/QuantityUnit.pm -- Around line 284: '=item' outside of any '=over' Around line 369: You forgot a '=back' before '=head2' Around line 545: Expected '=item 2' Around line 550: Expected '=item 3' Around line 555: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/TemperatureUnit.pm -- Around line 278: '=item' outside of any '=over' Around line 363: You forgot a '=back' before '=head2' Around line 539: Expected '=item 2' Around line 544: Expected '=item 3' Around line 549: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/TimeUnit.pm -- Around line 284: '=item' outside of any '=over' Around line 369: You forgot a '=back' before '=head2' Around line 545: Expected '=item 2' Around line 550: Expected '=item 3' Around line 555: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/Unit.pm -- Around line 299: '=item' outside of any '=over' Around line 384: You forgot a '=back' before '=head2' Around line 484: Expected '=item 2' Around line 489: Expected '=item 3' Around line 494: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Measurement/VolumeUnit.pm -- Around line 284: '=item' outside of any '=over' Around line 369: You forgot a '=back' before '=head2' Around line 545: Expected '=item 2' Around line 550: Expected '=item 3' Around line 555: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/NameValueType.pm -- Around line 293: '=item' outside of any '=over' Around line 378: You forgot a '=back' before '=head2' Around line 622: Expected '=item 2' Around line 627: Expected '=item 3' Around line 632: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/Hardware.pm -- Around line 456: '=item' outside of any '=over' Around line 541: You forgot a '=back' before '=head2' Around line 929: Expected '=item 2' Around line 934: Expected '=item 3' Around line 939: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/HardwareApplication.pm -- Around line 351: '=item' outside of any '=over' Around line 436: You forgot a '=back' before '=head2' Around line 536: Expected '=item 2' Around line 541: Expected '=item 3' Around line 546: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/Parameter.pm -- Around line 382: '=item' outside of any '=over' Around line 467: You forgot a '=back' before '=head2' Around line 639: Expected '=item 2' Around line 644: Expected '=item 3' Around line 649: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/ParameterValue.pm -- Around line 299: '=item' outside of any '=over' Around line 384: You forgot a '=back' before '=head2' Around line 484: Expected '=item 2' Around line 489: Expected '=item 3' Around line 494: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/Parameterizable.pm -- Around line 374: '=item' outside of any '=over' Around line 459: You forgot a '=back' before '=head2' Around line 703: Expected '=item 2' Around line 708: Expected '=item 3' Around line 713: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/ParameterizableApplication.pm -- Around line 348: '=item' outside of any '=over' Around line 433: You forgot a '=back' before '=head2' Around line 461: Expected '=item 2' Around line 466: Expected '=item 3' Around line 471: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/Protocol.pm -- Around line 456: '=item' outside of any '=over' Around line 541: You forgot a '=back' before '=head2' Around line 929: Expected '=item 2' Around line 934: Expected '=item 3' Around line 939: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/ProtocolApplication.pm -- Around line 450: '=item' outside of any '=over' Around line 535: You forgot a '=back' before '=head2' Around line 635: Expected '=item 2' Around line 640: Expected '=item 3' Around line 645: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/Software.pm -- Around line 471: '=item' outside of any '=over' Around line 556: You forgot a '=back' before '=head2' Around line 800: Expected '=item 2' Around line 805: Expected '=item 3' Around line 810: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/Protocol/SoftwareApplication.pm -- Around line 360: '=item' outside of any '=over' Around line 445: You forgot a '=back' before '=head2' Around line 617: Expected '=item 2' Around line 622: Expected '=item 3' Around line 627: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/ConfidenceIndicator.pm -- Around line 435: '=item' outside of any '=over' Around line 520: You forgot a '=back' before '=head2' Around line 764: Expected '=item 2' Around line 769: Expected '=item 3' Around line 774: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/DerivedSignal.pm -- Around line 390: '=item' outside of any '=over' Around line 475: You forgot a '=back' before '=head2' Around line 719: Expected '=item 2' Around line 724: Expected '=item 3' Around line 729: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/Error.pm -- Around line 403: '=item' outside of any '=over' Around line 488: You forgot a '=back' before '=head2' Around line 732: Expected '=item 2' Around line 737: Expected '=item 3' Around line 742: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/ExpectedValue.pm -- Around line 403: '=item' outside of any '=over' Around line 488: You forgot a '=back' before '=head2' Around line 732: Expected '=item 2' Around line 737: Expected '=item 3' Around line 742: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/Failed.pm -- Around line 390: '=item' outside of any '=over' Around line 475: You forgot a '=back' before '=head2' Around line 719: Expected '=item 2' Around line 724: Expected '=item 3' Around line 729: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/MeasuredSignal.pm -- Around line 390: '=item' outside of any '=over' Around line 475: You forgot a '=back' before '=head2' Around line 719: Expected '=item 2' Around line 724: Expected '=item 3' Around line 729: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/PValue.pm -- Around line 403: '=item' outside of any '=over' Around line 488: You forgot a '=back' before '=head2' Around line 732: Expected '=item 2' Around line 737: Expected '=item 3' Around line 742: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/PresentAbsent.pm -- Around line 390: '=item' outside of any '=over' Around line 475: You forgot a '=back' before '=head2' Around line 719: Expected '=item 2' Around line 724: Expected '=item 3' Around line 729: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/QuantitationType.pm -- Around line 500: '=item' outside of any '=over' Around line 585: You forgot a '=back' before '=head2' Around line 829: Expected '=item 2' Around line 834: Expected '=item 3' Around line 839: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/Ratio.pm -- Around line 390: '=item' outside of any '=over' Around line 475: You forgot a '=back' before '=head2' Around line 719: Expected '=item 2' Around line 724: Expected '=item 3' Around line 729: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/SpecializedQuantitationType.pm -- Around line 390: '=item' outside of any '=over' Around line 475: You forgot a '=back' before '=head2' Around line 719: Expected '=item 2' Around line 724: Expected '=item 3' Around line 729: Expected '=item 4' Bio-MAGE-20030502.3/MAGE/QuantitationType/StandardQuantitationType.pm -- Around line 411: '=item' outside of any '=over' Around line 496: You forgot a '=back' before '=head2' Around line 740: Expected '=item 2' Around line 745: Expected '=item 3' Around line 750: Expected '=item 4'

proper_libs

MAGE.pm, MAGE/Array.pm, MAGE/Array/Array.pm, MAGE/Array/ArrayGroup.pm, MAGE/Array/ArrayManufacture.pm, MAGE/Array/ArrayManufactureDeviation.pm, MAGE/Array/FeatureDefect.pm, MAGE/Array/Fiducial.pm, MAGE/Array/ManufactureLIMS.pm, MAGE/Array/ManufactureLIMSBiomaterial.pm, MAGE/Array/PositionDelta.pm, MAGE/Array/ZoneDefect.pm, MAGE/ArrayDesign.pm, MAGE/ArrayDesign/ArrayDesign.pm, MAGE/ArrayDesign/CompositeGroup.pm, MAGE/ArrayDesign/DesignElementGroup.pm, MAGE/ArrayDesign/FeatureGroup.pm, MAGE/ArrayDesign/PhysicalArrayDesign.pm, MAGE/ArrayDesign/ReporterGroup.pm, MAGE/ArrayDesign/Zone.pm, MAGE/ArrayDesign/ZoneGroup.pm, MAGE/ArrayDesign/ZoneLayout.pm, MAGE/Association.pm, MAGE/AuditAndSecurity.pm, MAGE/AuditAndSecurity/Audit.pm, MAGE/AuditAndSecurity/Contact.pm, MAGE/AuditAndSecurity/Organization.pm, MAGE/AuditAndSecurity/Person.pm, MAGE/AuditAndSecurity/Security.pm, MAGE/AuditAndSecurity/SecurityGroup.pm, MAGE/BQS.pm, MAGE/BQS/BibliographicReference.pm, MAGE/Base.pm, MAGE/BioAssay.pm, MAGE/BioAssay/BioAssay.pm, MAGE/BioAssay/BioAssayCreation.pm, MAGE/BioAssay/BioAssayTreatment.pm, MAGE/BioAssay/Channel.pm, MAGE/BioAssay/DerivedBioAssay.pm, MAGE/BioAssay/FeatureExtraction.pm, MAGE/BioAssay/Hybridization.pm, MAGE/BioAssay/Image.pm, MAGE/BioAssay/ImageAcquisition.pm, MAGE/BioAssay/MeasuredBioAssay.pm, MAGE/BioAssay/PhysicalBioAssay.pm, MAGE/BioAssayData.pm, MAGE/BioAssayData/BioAssayData.pm, MAGE/BioAssayData/BioAssayDatum.pm, MAGE/BioAssayData/BioAssayDimension.pm, MAGE/BioAssayData/BioAssayMap.pm, MAGE/BioAssayData/BioAssayMapping.pm, MAGE/BioAssayData/BioDataCube.pm, MAGE/BioAssayData/BioDataTuples.pm, MAGE/BioAssayData/BioDataValues.pm, MAGE/BioAssayData/CompositeSequenceDimension.pm, MAGE/BioAssayData/DerivedBioAssayData.pm, MAGE/BioAssayData/DesignElementDimension.pm, MAGE/BioAssayData/DesignElementMap.pm, MAGE/BioAssayData/DesignElementMapping.pm, MAGE/BioAssayData/FeatureDimension.pm, MAGE/BioAssayData/MeasuredBioAssayData.pm, MAGE/BioAssayData/QuantitationTypeDimension.pm, MAGE/BioAssayData/QuantitationTypeMap.pm, MAGE/BioAssayData/QuantitationTypeMapping.pm, MAGE/BioAssayData/ReporterDimension.pm, MAGE/BioAssayData/Transformation.pm, MAGE/BioEvent.pm, MAGE/BioEvent/BioEvent.pm, MAGE/BioEvent/Map.pm, MAGE/BioMaterial.pm, MAGE/BioMaterial/BioMaterial.pm, MAGE/BioMaterial/BioMaterialMeasurement.pm, MAGE/BioMaterial/BioSample.pm, MAGE/BioMaterial/BioSource.pm, MAGE/BioMaterial/Compound.pm, MAGE/BioMaterial/CompoundMeasurement.pm, MAGE/BioMaterial/LabeledExtract.pm, MAGE/BioMaterial/Treatment.pm, MAGE/BioSequence.pm, MAGE/BioSequence/BioSequence.pm, MAGE/BioSequence/SeqFeature.pm, MAGE/BioSequence/SeqFeatureLocation.pm, MAGE/BioSequence/SequencePosition.pm, MAGE/Describable.pm, MAGE/Description.pm, MAGE/Description/Database.pm, MAGE/Description/DatabaseEntry.pm, MAGE/Description/Description.pm, MAGE/Description/ExternalReference.pm, MAGE/Description/OntologyEntry.pm, MAGE/DesignElement.pm, MAGE/DesignElement/CompositeCompositeMap.pm, MAGE/DesignElement/CompositePosition.pm, MAGE/DesignElement/CompositeSequence.pm, MAGE/DesignElement/DesignElement.pm, MAGE/DesignElement/Feature.pm, MAGE/DesignElement/FeatureInformation.pm, MAGE/DesignElement/FeatureLocation.pm, MAGE/DesignElement/FeatureReporterMap.pm, MAGE/DesignElement/MismatchInformation.pm, MAGE/DesignElement/Position.pm, MAGE/DesignElement/Reporter.pm, MAGE/DesignElement/ReporterCompositeMap.pm, MAGE/DesignElement/ReporterPosition.pm, MAGE/Experiment.pm, MAGE/Experiment/Experiment.pm, MAGE/Experiment/ExperimentDesign.pm, MAGE/Experiment/ExperimentalFactor.pm, MAGE/Experiment/FactorValue.pm, MAGE/Extendable.pm, MAGE/HigherLevelAnalysis.pm, MAGE/HigherLevelAnalysis/BioAssayDataCluster.pm, MAGE/HigherLevelAnalysis/Node.pm, MAGE/HigherLevelAnalysis/NodeContents.pm, MAGE/HigherLevelAnalysis/NodeValue.pm, MAGE/Identifiable.pm, MAGE/Measurement.pm, MAGE/Measurement/ConcentrationUnit.pm, MAGE/Measurement/DistanceUnit.pm, MAGE/Measurement/MassUnit.pm, MAGE/Measurement/Measurement.pm, MAGE/Measurement/QuantityUnit.pm, MAGE/Measurement/TemperatureUnit.pm, MAGE/Measurement/TimeUnit.pm, MAGE/Measurement/Unit.pm, MAGE/Measurement/VolumeUnit.pm, MAGE/NameValueType.pm, MAGE/Protocol.pm, MAGE/Protocol/Hardware.pm, MAGE/Protocol/HardwareApplication.pm, MAGE/Protocol/Parameter.pm, MAGE/Protocol/ParameterValue.pm, MAGE/Protocol/Parameterizable.pm, MAGE/Protocol/ParameterizableApplication.pm, MAGE/Protocol/Protocol.pm, MAGE/Protocol/ProtocolApplication.pm, MAGE/Protocol/Software.pm, MAGE/Protocol/SoftwareApplication.pm, MAGE/QuantitationType.pm, MAGE/QuantitationType/ConfidenceIndicator.pm, MAGE/QuantitationType/DerivedSignal.pm, MAGE/QuantitationType/Error.pm, MAGE/QuantitationType/ExpectedValue.pm, MAGE/QuantitationType/Failed.pm, MAGE/QuantitationType/MeasuredSignal.pm, MAGE/QuantitationType/PValue.pm, MAGE/QuantitationType/PresentAbsent.pm, MAGE/QuantitationType/QuantitationType.pm, MAGE/QuantitationType/Ratio.pm, MAGE/QuantitationType/SpecializedQuantitationType.pm, MAGE/QuantitationType/StandardQuantitationType.pm, classes.pm

use_strict

classes

use_warnings

Bio::MAGE, Bio::MAGE::Array, Bio::MAGE::Array::Array, Bio::MAGE::Array::ArrayGroup, Bio::MAGE::Array::ArrayManufacture, Bio::MAGE::Array::ArrayManufactureDeviation, Bio::MAGE::Array::FeatureDefect, Bio::MAGE::Array::Fiducial, Bio::MAGE::Array::ManufactureLIMS, Bio::MAGE::Array::ManufactureLIMSBiomaterial, Bio::MAGE::Array::PositionDelta, Bio::MAGE::Array::ZoneDefect, Bio::MAGE::ArrayDesign, Bio::MAGE::ArrayDesign::ArrayDesign, Bio::MAGE::ArrayDesign::CompositeGroup, Bio::MAGE::ArrayDesign::DesignElementGroup, Bio::MAGE::ArrayDesign::FeatureGroup, Bio::MAGE::ArrayDesign::PhysicalArrayDesign, Bio::MAGE::ArrayDesign::ReporterGroup, Bio::MAGE::ArrayDesign::Zone, Bio::MAGE::ArrayDesign::ZoneGroup, Bio::MAGE::ArrayDesign::ZoneLayout, Bio::MAGE::Association, Bio::MAGE::AuditAndSecurity, Bio::MAGE::AuditAndSecurity::Audit, Bio::MAGE::AuditAndSecurity::Contact, Bio::MAGE::AuditAndSecurity::Organization, Bio::MAGE::AuditAndSecurity::Person, Bio::MAGE::AuditAndSecurity::Security, Bio::MAGE::AuditAndSecurity::SecurityGroup, Bio::MAGE::BQS, Bio::MAGE::BQS::BibliographicReference, Bio::MAGE::Base, Bio::MAGE::BioAssay, Bio::MAGE::BioAssay::BioAssay, Bio::MAGE::BioAssay::BioAssayCreation, Bio::MAGE::BioAssay::BioAssayTreatment, Bio::MAGE::BioAssay::Channel, Bio::MAGE::BioAssay::DerivedBioAssay, Bio::MAGE::BioAssay::FeatureExtraction, Bio::MAGE::BioAssay::Hybridization, Bio::MAGE::BioAssay::Image, Bio::MAGE::BioAssay::ImageAcquisition, Bio::MAGE::BioAssay::MeasuredBioAssay, Bio::MAGE::BioAssay::PhysicalBioAssay, Bio::MAGE::BioAssayData, Bio::MAGE::BioAssayData::BioAssayData, Bio::MAGE::BioAssayData::BioAssayDatum, Bio::MAGE::BioAssayData::BioAssayDimension, Bio::MAGE::BioAssayData::BioAssayMap, Bio::MAGE::BioAssayData::BioAssayMapping, Bio::MAGE::BioAssayData::BioDataCube, Bio::MAGE::BioAssayData::BioDataTuples, Bio::MAGE::BioAssayData::BioDataValues, Bio::MAGE::BioAssayData::CompositeSequenceDimension, Bio::MAGE::BioAssayData::DerivedBioAssayData, Bio::MAGE::BioAssayData::DesignElementDimension, Bio::MAGE::BioAssayData::DesignElementMap, Bio::MAGE::BioAssayData::DesignElementMapping, Bio::MAGE::BioAssayData::FeatureDimension, Bio::MAGE::BioAssayData::MeasuredBioAssayData, Bio::MAGE::BioAssayData::QuantitationTypeDimension, Bio::MAGE::BioAssayData::QuantitationTypeMap, Bio::MAGE::BioAssayData::QuantitationTypeMapping, Bio::MAGE::BioAssayData::ReporterDimension, Bio::MAGE::BioAssayData::Transformation, Bio::MAGE::BioEvent, Bio::MAGE::BioEvent::BioEvent, Bio::MAGE::BioEvent::Map, Bio::MAGE::BioMaterial, Bio::MAGE::BioMaterial::BioMaterial, Bio::MAGE::BioMaterial::BioMaterialMeasurement, Bio::MAGE::BioMaterial::BioSample, Bio::MAGE::BioMaterial::BioSource, Bio::MAGE::BioMaterial::Compound, Bio::MAGE::BioMaterial::CompoundMeasurement, Bio::MAGE::BioMaterial::LabeledExtract, Bio::MAGE::BioMaterial::Treatment, Bio::MAGE::BioSequence, Bio::MAGE::BioSequence::BioSequence, Bio::MAGE::BioSequence::SeqFeature, Bio::MAGE::BioSequence::SeqFeatureLocation, Bio::MAGE::BioSequence::SequencePosition, Bio::MAGE::Describable, Bio::MAGE::Description, Bio::MAGE::Description::Database, Bio::MAGE::Description::DatabaseEntry, Bio::MAGE::Description::Description, Bio::MAGE::Description::ExternalReference, Bio::MAGE::Description::OntologyEntry, Bio::MAGE::DesignElement, Bio::MAGE::DesignElement::CompositeCompositeMap, Bio::MAGE::DesignElement::CompositePosition, Bio::MAGE::DesignElement::CompositeSequence, Bio::MAGE::DesignElement::DesignElement, Bio::MAGE::DesignElement::Feature, Bio::MAGE::DesignElement::FeatureInformation, Bio::MAGE::DesignElement::FeatureLocation, Bio::MAGE::DesignElement::FeatureReporterMap, Bio::MAGE::DesignElement::MismatchInformation, Bio::MAGE::DesignElement::Position, Bio::MAGE::DesignElement::Reporter, Bio::MAGE::DesignElement::ReporterCompositeMap, Bio::MAGE::DesignElement::ReporterPosition, Bio::MAGE::Experiment, Bio::MAGE::Experiment::Experiment, Bio::MAGE::Experiment::ExperimentDesign, Bio::MAGE::Experiment::ExperimentalFactor, Bio::MAGE::Experiment::FactorValue, Bio::MAGE::Extendable, Bio::MAGE::HigherLevelAnalysis, Bio::MAGE::HigherLevelAnalysis::BioAssayDataCluster, Bio::MAGE::HigherLevelAnalysis::Node, Bio::MAGE::HigherLevelAnalysis::NodeContents, Bio::MAGE::HigherLevelAnalysis::NodeValue, Bio::MAGE::Identifiable, Bio::MAGE::Measurement, Bio::MAGE::Measurement::ConcentrationUnit, Bio::MAGE::Measurement::DistanceUnit, Bio::MAGE::Measurement::MassUnit, Bio::MAGE::Measurement::Measurement, Bio::MAGE::Measurement::QuantityUnit, Bio::MAGE::Measurement::TemperatureUnit, Bio::MAGE::Measurement::TimeUnit, Bio::MAGE::Measurement::Unit, Bio::MAGE::Measurement::VolumeUnit, Bio::MAGE::NameValueType, Bio::MAGE::Protocol, Bio::MAGE::Protocol::Hardware, Bio::MAGE::Protocol::HardwareApplication, Bio::MAGE::Protocol::Parameter, Bio::MAGE::Protocol::ParameterValue, Bio::MAGE::Protocol::Parameterizable, Bio::MAGE::Protocol::ParameterizableApplication, Bio::MAGE::Protocol::Protocol, Bio::MAGE::Protocol::ProtocolApplication, Bio::MAGE::Protocol::Software, Bio::MAGE::Protocol::SoftwareApplication, Bio::MAGE::QuantitationType, Bio::MAGE::QuantitationType::ConfidenceIndicator, Bio::MAGE::QuantitationType::DerivedSignal, Bio::MAGE::QuantitationType::Error, Bio::MAGE::QuantitationType::ExpectedValue, Bio::MAGE::QuantitationType::Failed, Bio::MAGE::QuantitationType::MeasuredSignal, Bio::MAGE::QuantitationType::PValue, Bio::MAGE::QuantitationType::PresentAbsent, Bio::MAGE::QuantitationType::QuantitationType, Bio::MAGE::QuantitationType::Ratio, Bio::MAGE::QuantitationType::SpecializedQuantitationType, Bio::MAGE::QuantitationType::StandardQuantitationType, classes