- Released by
- MTW
- Version
- Release Date
- 2018-07-03
- Kwalitee
- 146.88
- Core Kwalitee
- 93.75
- LINKS
Bio-ViennaNGS v0.19
Files
- AUTHORS
- Changes
- Doxyfile
- MANIFEST
- META.json
- META.yml
- Makefile.PL
- README
- inc/File/ShareDir/Install.pm
- lib/Bio/ViennaNGS.pm
- lib/Bio/ViennaNGS/AnnoC.pm
- lib/Bio/ViennaNGS/Bam.pm
- lib/Bio/ViennaNGS/Bed.pm
- lib/Bio/ViennaNGS/BedGraphEntry.pm
- lib/Bio/ViennaNGS/Expression.pm
- lib/Bio/ViennaNGS/ExtFeature.pm
- lib/Bio/ViennaNGS/Fasta.pm
- lib/Bio/ViennaNGS/Feature.pm
- lib/Bio/ViennaNGS/FeatureChain.pm
- lib/Bio/ViennaNGS/FeatureIO.pm
- lib/Bio/ViennaNGS/FeatureInterval.pm
- lib/Bio/ViennaNGS/FeatureIntervalN.pm
- lib/Bio/ViennaNGS/FeatureLine.pm
- lib/Bio/ViennaNGS/MinimalFeature.pm
- lib/Bio/ViennaNGS/Peak.pm
- lib/Bio/ViennaNGS/SpliceJunc.pm
- lib/Bio/ViennaNGS/Subtypes.pm
- lib/Bio/ViennaNGS/Tutorial.pm
- lib/Bio/ViennaNGS/UCSC.pm
- lib/Bio/ViennaNGS/Util.pm
- scripts/Tutorial_pipeline03.pl
- scripts/assembly_hub_constructor.pl
- scripts/bam_split.pl
- scripts/bam_to_bigwig.pl
- scripts/bam_uniq.pl
- scripts/bed2bedGraph.pl
- scripts/bed2nt2aa.pl
- scripts/bed62bed12.pl
- scripts/fasta_multigrep.pl
- scripts/fasta_regex.pl
- scripts/fasta_subgrep.pl
- scripts/gff2bed.pl
- scripts/kmer_analysis.pl
- scripts/newUCSCdb.pl
- scripts/normalize_multicov.pl
- scripts/rnaseq_peakfinder.pl
- scripts/sj_visualizer.pl
- scripts/splice_site_summary.pl
- scripts/track_hub_constructor.pl
- scripts/trim_fastq.pl
- share/data1/NC_000913.3.30k.fa
- share/data1/NC_000913.3.30k.gff
- share/data1/NC_000913.3.chrom.sizes
- share/data1/NC_000913.CDS.bed
- share/data1/NC_000913.CDS.bed6
- share/data1/SRR794848.8k.bam
- share/data2/MIOS.bed12
- share/data2/MIOS_sj.bed
- share/data3/all_DENVG_5UTR.fa
- share/template-AssemblyHub/description.html
- share/template-AssemblyHub/genome.txt
- share/template-AssemblyHub/groups.txt
- share/template-AssemblyHub/hub.txt
- share/template-AssemblyHub/trackDb.txt
- share/template-TrackHub/description.html
- share/template-TrackHub/genome.txt
- share/template-TrackHub/hub.txt
- share/template-TrackHub/trackDb.txt
- t/00-prereq.t
- t/01-load.t
- t/02-thirdparty.t
- t/04-UCSC-TrackHub.t
- t/05-UCSC-AssemblyHub.t
- t/06-SpliceJunc.t
- t/07-FeatureIO.t
- t/08-FeatureInterval.t
- t/09-MinimalFeature.t
- t/10-Features.t
- t/11-BedGraphEntry.t