Bio::ToolBox |
Tools for querying and analysis of genomic data |
2.01 |
metacpan |
Bio::ToolBox::Data |
Reading, writing, and manipulating data structure |
2.01 |
metacpan |
Bio::ToolBox::Data::Feature |
Objects representing rows in a data table |
2.00 |
metacpan |
Bio::ToolBox::Data::Iterator |
Class for iterating through Data tables |
2.00 |
metacpan |
Bio::ToolBox::Data::Stream |
Read, Write, and Manipulate Data File Line by Line |
2.00 |
metacpan |
Bio::ToolBox::Data::core |
Common functions to Bio:ToolBox::Data family |
2.00 |
metacpan |
Bio::ToolBox::Data::file |
File functions to Bio:ToolBox::Data family |
2.01 |
metacpan |
Bio::ToolBox::GeneTools |
SeqFeature agnostic methods for working with gene models |
2.00 |
metacpan |
Bio::ToolBox::Parser |
generic parsing tool for GFF, UCSC, BED |
2.00 |
metacpan |
Bio::ToolBox::Parser::bed |
Parser for BED-style formats |
2.00 |
metacpan |
Bio::ToolBox::Parser::gff |
parse GFF3, GTF, and generic GFF files |
2.01 |
metacpan |
Bio::ToolBox::Parser::ucsc |
Parser for UCSC genePred, refFlat, etc formats |
2.00 |
metacpan |
Bio::ToolBox::Parser::ucsc::builder |
Build gene and transcript SeqFeatures from UCSC formats |
2.00 |
metacpan |
Bio::ToolBox::SeqFeature |
Fast, simple SeqFeature implementation |
2.00 |
metacpan |
Bio::ToolBox::big_helper |
|
2.00 |
metacpan |
Bio::ToolBox::db_helper |
helper interface to various database formats |
2.00 |
metacpan |
Bio::ToolBox::db_helper::alignment_callbacks |
|
2.00 |
metacpan |
Bio::ToolBox::db_helper::bam |
|
2.00 |
metacpan |
Bio::ToolBox::db_helper::big |
|
2.00 |
metacpan |
Bio::ToolBox::db_helper::big::BedIteratorWrapper |
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|
metacpan |
Bio::ToolBox::db_helper::big::BigWigSet |
|
|
metacpan |
Bio::ToolBox::db_helper::bigbed |
|
2.00 |
metacpan |
Bio::ToolBox::db_helper::bigwig |
|
2.00 |
metacpan |
Bio::ToolBox::db_helper::config |
|
2.00 |
metacpan |
Bio::ToolBox::db_helper::constants |
|
2.00 |
metacpan |
Bio::ToolBox::db_helper::hts |
|
2.00 |
metacpan |
Bio::ToolBox::db_helper::seqfasta |
|
2.00 |
metacpan |
Bio::ToolBox::db_helper::useq |
|
2.00 |
metacpan |
Bio::ToolBox::db_helper::wiggle |
|
2.00 |
metacpan |
Bio::ToolBox::utility |
common utility functions for Bio::ToolBox |
2.01 |
metacpan |