Files

• GOBO.pm
• GOBO/AmiGO/Indexes/AmiGOStatementIndex.pm
• GOBO/AmiGO/Indexes/AmiGOWrapper.pm
• GOBO/Analysis/AnalysisEngine.pm
• GOBO/Annotation.pm
• GOBO/Attributed.pm
• GOBO/Base.pm
• GOBO/Bridges/Bio/TreeBridge.pm
• GOBO/Bridges/Bridge.pm
• GOBO/ClassExpression.pm
• GOBO/ClassExpression/BooleanExpression.pm
• GOBO/ClassExpression/Complement.pm
• GOBO/ClassExpression/Intersection.pm
• GOBO/ClassExpression/RelationalExpression.pm
• GOBO/ClassExpression/Union.pm
• GOBO/ClassNode.pm
• GOBO/DB/AnnotationBulkLoader.pm
• GOBO/DBIC/GODBModel.pm
• GOBO/DBIC/GODBModel/Extension.pm
• GOBO/DBIC/GODBModel/Graph.pm
• GOBO/DBIC/GODBModel/GraphT2T.pm
• GOBO/DBIC/GODBModel/Query.pm
• GOBO/DBIC/GODBModel/Resolver.pm
• GOBO/DBIC/GODBModel/Schema.pm
• GOBO/DBIC/GODBModel/Schema/Association.pm
• GOBO/DBIC/GODBModel/Schema/DB.pm
• GOBO/DBIC/GODBModel/Schema/DBXRef.pm
• GOBO/DBIC/GODBModel/Schema/Evidence.pm
• GOBO/DBIC/GODBModel/Schema/EvidenceDBXRef.pm
• GOBO/DBIC/GODBModel/Schema/GeneProduct.pm
• GOBO/DBIC/GODBModel/Schema/GeneProductCount.pm
• GOBO/DBIC/GODBModel/Schema/GeneProductHomolset.pm
• GOBO/DBIC/GODBModel/Schema/GeneProductSeq.pm
• GOBO/DBIC/GODBModel/Schema/GeneProductSynonym.pm
• GOBO/DBIC/GODBModel/Schema/GraphPath.pm
• GOBO/DBIC/GODBModel/Schema/Homolset.pm
• GOBO/DBIC/GODBModel/Schema/InstanceData.pm
• GOBO/DBIC/GODBModel/Schema/Seq.pm
• GOBO/DBIC/GODBModel/Schema/SeqDBXRef.pm
• GOBO/DBIC/GODBModel/Schema/Species.pm
• GOBO/DBIC/GODBModel/Schema/Term.pm
• GOBO/DBIC/GODBModel/Schema/Term2Term.pm
• GOBO/DBIC/GODBModel/Schema/TermDBXRef.pm
• GOBO/DBIC/GODBModel/Schema/TermSynonym.pm
• GOBO/DBIC/t/godbm_graph.t
• GOBO/DBIC/t/godbm_query.t
• GOBO/Definable.pm
• GOBO/Doc/FAQ.pm
• GOBO/Error.pm
• GOBO/Evidence.pm
• GOBO/Formula.pm
• GOBO/Gene.pm
• GOBO/Graph.pm
• GOBO/Identified.pm
• GOBO/Indexes/NodeIndex.pm
• GOBO/Indexes/StatementIndex.pm
• GOBO/InferenceEngine.pm
• GOBO/InferenceEngine/GAFInferenceEngine.pm
• GOBO/InstanceNode.pm
• GOBO/Labeled.pm
• GOBO/LinkStatement.pm
• GOBO/LiteralStatement.pm
• GOBO/NegatedStatement.pm
• GOBO/Node.pm
• GOBO/Parsers/GAFParser.pm
• GOBO/Parsers/GraphParser.pm
• GOBO/Parsers/OBOParser.pm
• GOBO/Parsers/OBOParserDispatchHash.pm
• GOBO/Parsers/Parser.pm
• GOBO/Phylo/Branch.pm
• GOBO/Phylo/PhyloNode.pm
• GOBO/Phylo/PhyloTree.pm
• GOBO/RelationNode.pm
• GOBO/SimpleRDF/Indexes/SimpleRDFStatementIndex.pm
• GOBO/SimpleRDF/Indexes/SimpleRDFWrapper.pm
• GOBO/Statement.pm
• GOBO/Subset.pm
• GOBO/Synonym.pm
• GOBO/TermNode.pm
• GOBO/Util/GraphFunctions.pm
• GOBO/Util/LuceneIndexer.pm
• GOBO/Writers/CustomizableWriter.pm
• GOBO/Writers/GAFWriter.pm
• GOBO/Writers/OBOWriter.pm
• GOBO/Writers/OBOXMLWriter.pm
• GOBO/Writers/Writer.pm
• LOG
• META.yml
• Makefile.PL
• README
• bin/compare-graphs.pl
• bin/go-gaf-extract.pl
• bin/go-gaf-inference.pl
• bin/go-gaf-summarize.pl
• bin/go-slimdown.pl
• bin/gobo-io-expand-xp.pl
• bin/gobo-io.pl
• bin/gobo-make-lucene-index.pl
• bin/gobo-map-ids.pl
• bin/gom-gaf.pl
• bin/make-lucene-index-for-foundry.pl
• bin/mapmaker.pl
• go-moose-model.graffle
• pm_to_blib
• slimfile.obo
• t/analysis_test.t
• t/classexpr.t
• t/data/128up.gaf
• t/data/AT1G49810.gaf
• t/data/UnionTerms.obo
• t/data/cell.obo
• t/data/cell_union.obo
• t/data/gene_association.mgi.gaf2
• t/data/gene_association.mgi.gz
• t/data/gene_ontology_write.obo
• t/data/gpcr.nhx
• t/data/gtp.obo
• t/data/invalid_taxon_test.gaf
• t/data/obo_file.obo
• t/data/obo_file_2.obo
• t/data/relation_test.obo
• t/data/round_import.obo
• t/data/roundtripme.obo
• t/data/simple-annot-stanza-example.obo
• t/data/so-xp.obo
• t/data/sox9b_zfin.obo
• t/data/test-fb.gaf
• t/data/transporters.obo
• t/data/transporters.pro
• t/data/transporters.qlf
• t/dbconnect.t
• t/gaf_inference_test.t
• t/gaftest.t
• t/gaftest_chunked.t
• t/gaftest_chunked_gzipped.t
• t/graph_creation.t
• t/inference_engine_test.t
• t/logical_definition_test.t
• t/node_removal.t
• t/oboparsertest.t
• t/parsetest.t
• t/relation_test.t
• t/roundtrip.t
• t/slimmer_test.t
• t/union_inference_test.t