Bio-DB-HTS 3.01 Latest
Files
- Build.PL
- Changes
- DISCLAIMER
- INSTALL.pl
- LICENSE
- MANIFEST
- META.json
- META.yml
- README
- cpanfile
- lib/Bio/DB/HTS.pm
- lib/Bio/DB/HTS.xs
- lib/Bio/DB/HTS/AlignWrapper.pm
- lib/Bio/DB/HTS/Alignment.pm
- lib/Bio/DB/HTS/Constants.pm
- lib/Bio/DB/HTS/Faidx.pm
- lib/Bio/DB/HTS/Faidx.xs
- lib/Bio/DB/HTS/FetchIterator.pm
- lib/Bio/DB/HTS/Kseq.pm
- lib/Bio/DB/HTS/Kseq/Iterator.pod
- lib/Bio/DB/HTS/Kseq/Record.pm
- lib/Bio/DB/HTS/Pileup.pm
- lib/Bio/DB/HTS/PileupWrapper.pm
- lib/Bio/DB/HTS/Query.pm
- lib/Bio/DB/HTS/ReadIterator.pm
- lib/Bio/DB/HTS/Segment.pm
- lib/Bio/DB/HTS/Tabix.pm
- lib/Bio/DB/HTS/Tabix/Iterator.pm
- lib/Bio/DB/HTS/Target.pm
- lib/Bio/DB/HTS/VCF.pm
- lib/Bio/DB/HTS/VCF/Header.pm
- lib/Bio/DB/HTS/VCF/HeaderPtr.pm
- lib/Bio/DB/HTS/VCF/Iterator.pm
- lib/Bio/DB/HTS/VCF/Row.pm
- lib/Bio/DB/HTS/VCF/RowPtr.pm
- ppport.h
- scripts/build_options.sh
- scripts/convert_gz_2_bgz.sh
- t/00load.t
- t/01bam.t
- t/02faidx.t
- t/03cram.t
- t/04tabix.t
- t/05vcf.t
- t/06kseq.t
- t/07cramwrite.t
- t/08bamwrite.t
- t/09sam.t
- t/10leak.t
- t/data/00README.txt
- t/data/Saccharomyces_cerevisiae.R64-1-1.dna.chromosome.I.fa.gz
- t/data/data.vcf.gz
- t/data/data.vcf.gz.tbi
- t/data/dm3_3R_4766911_4767130.sam
- t/data/dm3_3R_4766911_4767130.sam.bam
- t/data/dm3_3R_4766911_4767130.sam.sorted.bam
- t/data/ex1.bam
- t/data/ex1.fa
- t/data/ex1.sam.gz
- t/data/ex2.bam
- t/data/ex2.sam.gz
- t/data/ex3.bam
- t/data/ex3.bam.csi
- t/data/no_index.tsv.gz
- t/data/test.bcf
- t/data/test.bcf.csi
- t/data/test.sam
- t/data/test.tsv.gz
- t/data/test.tsv.gz.tbi
- t/data/test.vcf.gz
- t/data/test.vcf.gz.tbi
- t/data/yeast.fasta
- t/data/yeast.sorted.cram
- t/kseq_data/bug2335.fastq
- t/kseq_data/evil_wrapping.fastq
- t/kseq_data/example.fasta
- t/kseq_data/example.fastq
- t/kseq_data/illumina_faked.fastq
- t/kseq_data/sanger_93.fastq
- t/kseq_data/sanger_faked.fastq
- t/kseq_data/solexa_example.fastq
- t/kseq_data/solexa_faked.fastq
- t/kseq_data/test1_sanger.fastq
- t/kseq_data/test2_solexa.fastq
- t/kseq_data/test3_illumina.fastq
- t/kseq_data/tricky.fastq
- t/kseq_data/wrapping_issues.fastq
- t/kseq_data/zero_qual.fastq
- typemap