onto-perl 1.0
- Released by
- EASR
- Version
- Release Date
- 2007-10-29
- Kwalitee
- 134.38
- Core Kwalitee
- 90.62
- LINKS
onto-perl 1.0 Deleted
Kwalitee Issues
- meta_yml_conforms_to_known_spec
-
Take a look at the META.yml Spec at https://metacpan.org/pod/CPAN::Meta::History::Meta_1_4 (for version 1.4) or https://metacpan.org/pod/CPAN::Meta::Spec (for version 2), and change your META.yml accordingly.
Error: Expected a map structure from string or file. (requires) [Validation: 1.0]
- buildtool_not_executable
-
Change the permissions of Build.PL/Makefile.PL to not-executable.
- main_module_version_matches_dist_version
-
Make sure that the main module name and version are the same of the distribution.
- meta_yml_declares_perl_version
-
If you are using Build.PL define the {requires}{perl} = VERSION field. If you are using MakeMaker (Makefile.PL) you should upgrade ExtUtils::MakeMaker to 6.48 and use MIN_PERL_VERSION parameter. Perl::MinimumVersion can help you determine which version of Perl your module needs.
- has_meta_json
-
Add a META.json to the distribution. Your buildtool should be able to autogenerate it.
- proper_libs
-
Move your *.pm files in a directory named 'lib'. The directory structure should look like 'lib/Your/Module.pm' for a module named 'Your::Module'. If you need to provide additional files, e.g. for testing, that should not be considered for Kwalitee, then you should look at the 'provides' map in META.yml to limit the files scanned; or use the 'no_index' map to exclude parts of the distribution.
Error: CCO/Core/Dbxref.pm, CCO/Core/Def.pm, CCO/Core/GoaAssociation.pm, CCO/Core/IDspace.pm, CCO/Core/Interaction.pm, CCO/Core/Interactor.pm, CCO/Core/Ontology.pm, CCO/Core/Relationship.pm, CCO/Core/RelationshipType.pm, CCO/Core/Synonym.pm, CCO/Core/SynonymTypeDef.pm, CCO/Core/Term.pm, CCO/Parser/GoaParser.pm, CCO/Parser/IntActParser.pm, CCO/Parser/InteractionManager.pm, CCO/Parser/NCBIParser.pm, CCO/Parser/NewIntActParser.pm, CCO/Parser/OBOParser.pm, CCO/Parser/OWLParser.pm, CCO/Parser/OrthoMCLParser.pm, CCO/Parser/UniProtParser.pm, CCO/Util/CCO_ID.pm, CCO/Util/CCO_ID_Set.pm, CCO/Util/CCO_ID_Term_Map.pm, CCO/Util/DbxrefSet.pm, CCO/Util/GoaAssociationSet.pm, CCO/Util/ObjectIdSet.pm, CCO/Util/ObjectSet.pm, CCO/Util/Ontolome.pm, CCO/Util/Set.pm, CCO/Util/SynonymSet.pm, CCO/Util/SynonymTypeDefSet.pm, CCO/Util/TermSet.pm, CCO/Util/XMLIntactParser.pm
- meta_yml_has_license
-
Define the license if you are using in Build.PL. If you are using MakeMaker (Makefile.PL) you should upgrade to ExtUtils::MakeMaker version 6.31.
- use_warnings
-
Add 'use warnings' (or its equivalents) to all modules, or convince us that your favorite module is well-known enough and people can easily see the modules warn when something bad happens.
Error: CCO::Util::CCO_ID, CCO::Util::CCO_ID_Term_Map
- meta_yml_has_provides
-
Add all modules contained in this distribution to the META.yml field 'provides'. Module::Build or Dist::Zilla::Plugin::MetaProvides do this automatically for you.
- meta_yml_has_repository_resource
-
Add a 'repository' resource to the META.yml via 'meta_add' accessor (for Module::Build) or META_ADD parameter (for ExtUtils::MakeMaker).
- has_security_doc
-
Add SECURITY(.pod|md). See Software::Security::Policy.
- security_doc_contains_contact
-
Add SECURITY(.pod|md) and add a contact address. See Software::Security::Policy.
- has_contributing_doc
-
Add CONTRIBUTING(.pod|md). See https://docs.github.com/en/communities/setting-up-your-project-for-healthy-contributions/setting-guidelines-for-repository-contributors.
Modules
| Name | Abstract | Version | View |
|---|---|---|---|
| CCO::Core::Dbxref | Reference structure. | metacpan | |
| CCO::Core::Def | A definition structure of the current term. A term must have zero or one instance of this type per term description. | metacpan | |
| CCO::Core::GoaAssociation | metacpan | ||
| CCO::Core::IDspace | A mapping between a "local" ID space and a "global" ID space | metacpan | |
| CCO::Core::Interaction | An interaction from IntAct | metacpan | |
| CCO::Core::Interactor | An interactor from IntAct | metacpan | |
| CCO::Core::Ontology | An ontology holding terms and their relationships | metacpan | |
| CCO::Core::Relationship | A relationship between two terms or two relationships within an ontology. | metacpan | |
| CCO::Core::RelationshipType | A type of relationship type in an ontology | metacpan | |
| CCO::Core::Synonym | A term synonym | metacpan | |
| CCO::Core::SynonymTypeDef | A synonym type definition. It should contain a synonym type name, a space, a quote enclosed description, and an optional scope specifier. | metacpan | |
| CCO::Core::Term | A universal/term/class/concept in an ontology | metacpan | |
| CCO::Parser::GoaParser | A GOA associations to OBO translator. | metacpan | |
| CCO::Parser::IntActParser | metacpan | ||
| CCO::Parser::InteractionManager | metacpan | ||
| CCO::Parser::NCBIParser | metacpan | ||
| CCO::Parser::NewIntActParser | metacpan | ||
| CCO::Parser::OBOParser | metacpan | ||
| CCO::Parser::OWLParser | metacpan | ||
| CCO::Parser::OrthoMCLParser | metacpan | ||
| CCO::Parser::UniProtParser | A UniProt to OBO translator. | metacpan | |
| CCO::Util::CCO_ID | A module for describing Cell Cycle Ontology (CCO) identifiers. Its namespace, subnamespace and number are stored. | metacpan | |
| CCO::Util::CCO_ID_Set | An implementation of a set of CCO::Util::CCO_ID objects. | metacpan | |
| CCO::Util::CCO_ID_Term_Map | metacpan | ||
| CCO::Util::DbxrefSet | metacpan | ||
| CCO::Util::GoaAssociationSet | metacpan | ||
| CCO::Util::ObjectIdSet | A Set implementation of object Ids | metacpan | |
| CCO::Util::ObjectSet | An implementation of a set of ontology objects | metacpan | |
| CCO::Util::Ontolome | a set of ontologies | metacpan | |
| CCO::Util::Set | A Set implementation | metacpan | |
| CCO::Util::SynonymSet | A Set implementation of Synonyms | metacpan | |
| CCO::Util::SynonymTypeDefSet | A Set implementation of Synonym Types | metacpan | |
| CCO::Util::TermSet | A Set implementation | metacpan | |
| CCO::Util::XMLIntactParser | metacpan |