Bio-DB-HTS 1.08 Deleted
Kwalitee Issues
This is not the latest release. The following issues may have already been fixed in the newer releases.
No Core Issues.
- meta_yml_has_repository_resource
-
Add a 'repository' resource to the META.yml via 'meta_add' accessor (for Module::Build) or META_ADD parameter (for ExtUtils::MakeMaker).
- has_security_doc
-
Add SECURITY(.pod|md). See Software::Security::Policy.
- security_doc_contains_contact
-
Add SECURITY(.pod|md) and add a contact address. See Software::Security::Policy.
- has_contributing_doc
-
Add CONTRIBUTING(.pod|md). See https://docs.github.com/en/communities/setting-up-your-project-for-healthy-contributions/setting-guidelines-for-repository-contributors.
Modules
| Name | Abstract | Version | View |
|---|---|---|---|
| Bio::DB::HTS | Read SAM/BAM/CRAM database files | 1.08 | metacpan |
| Bio::DB::HTS::AlignWrapper | Add high-level methods to Bio::DB::HTS::Alignment | 1.08 | metacpan |
| Bio::DB::HTS::Alignment | The HTS alignment object | 1.08 | metacpan |
| Bio::DB::HTS::Constants | Constants for use with SAM/BAM | 1.08 | metacpan |
| Bio::DB::HTS::Fai | 1.08 | metacpan | |
| Bio::DB::HTS::Faidx | 1.08 | metacpan | |
| Bio::DB::HTS::FetchIterator | 1.08 | metacpan | |
| Bio::DB::HTS::HTSfile | 1.08 | metacpan | |
| Bio::DB::HTS::Pileup | Object passed to pileup() callback | 1.08 | metacpan |
| Bio::DB::HTS::PileupWrapper | Add high-level methods to Bio::DB::HTS::Pileup | 1.08 | metacpan |
| Bio::DB::HTS::Query | Object representing the query portion of a BAM/SAM alignment | 1.08 | metacpan |
| Bio::DB::HTS::ReadIterator | 1.08 | metacpan | |
| Bio::DB::HTS::Segment | 1.08 | metacpan | |
| Bio::DB::HTS::Segment::Iterator | 1.08 | metacpan | |
| Bio::DB::HTS::SplitAlignmentPart | 1.08 | metacpan | |
| Bio::DB::HTS::Tabix | Object oriented access to the underlying tbx C methods | 1.08 | metacpan |
| Bio::DB::HTS::Tabix::Iterator | XS module wrapping around a tabix hts_itr_t | 1.08 | metacpan |
| Bio::DB::HTS::Target | Object representing the query portion of a BAM/SAM alignment in NATIVE alignment | 1.08 | metacpan |
| Bio::DB::HTS::VCF | 1.08 | metacpan | |
| Bio::DB::HTSfile | metacpan | ||
| Bio::SeqFeature::HTSCoverage | 1.08 | metacpan |