go-db-perl 0.04
- Released by
- SJCARBON
- Version
- Release Date
- 2009-12-22
- Kwalitee
- 115.62
- Core Kwalitee
- 75
- LINKS
go-db-perl 0.04 Latest
Kwalitee Issues
- has_meta_yml
-
Add a META.yml to the distribution. Your buildtool should be able to autogenerate it.
- has_human_readable_license
-
Add a section called "LICENSE" to the documentation, or add a file named LICENSE to the distribution.
- has_license_in_source_file
-
Add =head1 LICENSE and the text of the license to the main module in your code.
- manifest_matches_dist
-
Run a proper command ("make manifest" or "./Build manifest", maybe with a force option), or use a distribution builder to generate the MANIFEST. Or update MANIFEST manually.
Error:
- MANIFEST (128) does not match dist (191):
- Missing in MANIFEST: CVS/Entries, CVS/Repository, CVS/Root, GO.pm, GO/AppHandles/.#AppHandleSqlImpl.pm.1.88, GO/AppHandles/.#AppHandleSqlImpl.pm.1.89, GO/AppHandles/CVS/Entries, GO/AppHandles/CVS/Repository, GO/AppHandles/CVS/Root, GO/CVS/Entries, GO/CVS/Repository, GO/CVS/Root, GO/Handlers/CVS/Entries, GO/Handlers/CVS/Repository, GO/Handlers/CVS/Root, GO/Reasoner.pm, doc/CVS/Entries, doc/CVS/Repository, doc/CVS/Root, scripts/CVS/Entries, scripts/CVS/Repository, scripts/CVS/Root, scripts/fill-path.pl, scripts/go-create-database-and-load.pl, scripts/go-db-reasoner.pl, scripts/go-do-nothing.pl, scripts/go-dump-owl.pl, scripts/go-noseq-load.pl, scripts/go-process-report-template.pl, scripts/go_db_install.pl, scripts/load-go-assoc-bulk.pl, scripts/load-linkfile-into-graph_path.pl, scripts/load-ppod-set-full.pl, scripts/load-refg-set-full.pl, scripts/load-refg-set.pl, scripts/load-sp-bulk.pl, scripts/load-tax-hierarchy-into-db.pl, scripts/scan_for_non-ascii.pl, t/CVS/Entries, t/CVS/Repository, t/CVS/Root, t/d190xrf_abbs.t, t/d200multispecies.t, t/d210annotation_properties.t, t/d220obsolete_metadata.t, t/d230load_synonym.t, t/d240load_refg.t, t/d250multiqualifiers.t, t/d260regulates.t, t/d270annotation_double_taxon.t, t/data/CVS/Entries, t/data/CVS/Repository, t/data/CVS/Root, t/data/GO.xrf_abbs, t/data/gene_assoc-with-quals.mgi, t/data/gene_association-ache.all, t/data/gene_association.multitaxontest, t/data/gene_association.pamgo.test, t/data/gene_association.test_properties, t/data/go-dual-test.obo, t/data/obsolete.obo, t/data/regulation_test.obo, t/data/test_synonym.obo, t/t460deep_product_count.t
- Missing in Dist: META.yml
- use_strict
-
Add 'use strict' (or its equivalents) to all modules, or convince us that your favorite module is well-known enough and people can easily see the modules are strictly written.
Error: GO::Handlers::db, GO::TestHarness
- prereq_matches_use
-
List all used modules in META.yml requires
Error:
- GO::Handlers::base
- GO::IO::Blast
- GO::Model::Association
- GO::Model::Evidence
- GO::Model::GeneProduct
- GO::Model::Graph
- GO::Model::Modification
- GO::Model::Relationship
- GO::Model::Root
- GO::Model::Term
- GO::Model::Xref
- GO::ObjFactory
- GO::Parser
- GO::Utils
- Inline
- Inline::C
- main_module_version_matches_dist_version
-
Make sure that the main module name and version are the same of the distribution.
- no_pod_errors
-
Remove the POD errors. You can check for POD errors automatically by including Test::Pod to your test suite.
Error: go-db-perl-0.04/GO/AppHandle.pm -- Around line 113: Non-ASCII character seen before =encoding in 'hþtp://www.geneontology.org'. Assuming CP1252 Around line 1183: '=item' outside of any '=over' Around line 1215: You forgot a '=back' before '=head3' go-db-perl-0.04/GO/AppHandles/AppHandleSqlImpl.pm -- Around line 1100: '=item' outside of any '=over' =over without closing =back go-db-perl-0.04/scripts/go-do-nothing.pl -- Around line 410: You forgot a '=back' before '=head1' go-db-perl-0.04/scripts/go-prepare-release.pl -- Around line 445: You forgot a '=back' before '=head1'
- has_meta_json
-
Add a META.json to the distribution. Your buildtool should be able to autogenerate it.
- no_stdin_for_prompting
-
Use the prompt() method from ExtUtils::MakeMaker/Module::Build.
- meta_yml_has_license
-
Define the license if you are using in Build.PL. If you are using MakeMaker (Makefile.PL) you should upgrade to ExtUtils::MakeMaker version 6.31.
- has_known_license_in_source_file
-
Add =head1 LICENSE and/or the proper text of the well-known license to the main module in your code.
- use_warnings
-
Add 'use warnings' (or its equivalents) to all modules, or convince us that your favorite module is well-known enough and people can easily see the modules warn when something bad happens.
Error: GO, GO::Admin, GO::AppHandle, GO::AppHandles::AppHandleAbstractSqlImpl, GO::AppHandles::AppHandleCWrapper, GO::AppHandles::AppHandleCachingImpl, GO::AppHandles::AppHandleChadoSqlImpl, GO::AppHandles::AppHandlePgImpl, GO::AppHandles::AppHandleSqlImpl, GO::DebugUtils, GO::Handlers::db, GO::Handlers::genericdb, GO::Handlers::godb, GO::Reasoner, GO::SqlWrapper, GO::Tango, GO::TestHarness
- test_prereq_matches_use
-
List all modules used in the test suite in META.yml test_requires
Error:
- GO::IO::Blast
- GO::Model::Evidence
- GO::Model::TreeIterator
- GO::Parser
- has_separate_license_file
-
This is not a critical issue. Currently mainly informative for the CPANTS authors. It might be removed later.
Modules
| Name | Abstract | Version | View |
|---|---|---|---|
| GO::Admin | metacpan | ||
| GO::AppHandle | Gene Ontology Data API handle | 0.01 | metacpan |
| GO::AppHandles::AppHandleAbstractSqlImpl | metacpan | ||
| GO::AppHandles::AppHandleCWrapper | metacpan | ||
| GO::AppHandles::AppHandleCachingImpl | metacpan | ||
| GO::AppHandles::AppHandleChadoSqlImpl | metacpan | ||
| GO::AppHandles::AppHandlePgImpl | metacpan | ||
| GO::AppHandles::AppHandleSqlImpl | metacpan | ||
| GO::DebugUtils | metacpan | ||
| GO::Handlers::db | metacpan | ||
| GO::Handlers::genericdb | metacpan | ||
| GO::Handlers::godb | Stores parse XML in GO DB | metacpan | |
| GO::SqlWrapper | metacpan | ||
| GO::Tango | Tango ANnotates GO | metacpan | |
| GO::TestHarness | metacpan |